Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF2O60811 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEF2O60811 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF2O60811 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF2O60811 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEF2O60811 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF2O60811 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF2O60811 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF2O60811 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF2O60811 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF2O60811 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF2O60811 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.46■□□□□ 0.22
PRAMEF2O60811 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.46■□□□□ 0.22
PRAMEF2O60811 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.46■□□□□ 0.22
PRAMEF2O60811 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF2O60811 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF2O60811 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
PRAMEF2O60811 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 HLA-J-201ENST00000462773 1622 ntBASIC16.45■□□□□ 0.22
PRAMEF2O60811 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 KRT18P67-201ENST00000432816 1264 ntBASIC16.45■□□□□ 0.22
PRAMEF2O60811 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 AC122714.2-201ENST00000502787 707 ntBASIC16.45■□□□□ 0.22
PRAMEF2O60811 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 AC011467.2-201ENST00000598425 242 ntBASIC16.45■□□□□ 0.22
PRAMEF2O60811 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 REXO1L11P-201ENST00000620964 1927 ntBASIC16.45■□□□□ 0.22
PRAMEF2O60811 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
PRAMEF2O60811 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF2O60811 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 RBM17P3-201ENST00000417687 1192 ntBASIC16.44■□□□□ 0.22
PRAMEF2O60811 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 AC005104.2-201ENST00000427818 678 ntBASIC16.44■□□□□ 0.22
PRAMEF2O60811 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 AC120114.3-201ENST00000611923 658 ntBASIC16.44■□□□□ 0.22
PRAMEF2O60811 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 BX640515.1-201ENST00000617215 977 ntBASIC16.44■□□□□ 0.22
PRAMEF2O60811 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF2O60811 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF2O60811 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF2O60811 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF2O60811 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms