Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 KRT18P57-201ENST00000443599 1254 ntBASIC15.83■□□□□ 0.12
SURF4O15260 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SURF4O15260 KRT18P21-201ENST00000515767 1272 ntBASIC15.83■□□□□ 0.12
SURF4O15260 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
SURF4O15260 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.83■□□□□ 0.12
SURF4O15260 AC005915.1-201ENST00000624912 2018 ntBASIC15.83■□□□□ 0.12
SURF4O15260 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.83■□□□□ 0.12
SURF4O15260 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SURF4O15260 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SURF4O15260 AC073508.3-201ENST00000619697 1419 ntBASIC15.83■□□□□ 0.12
SURF4O15260 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SURF4O15260 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 PCDHB19P-201ENST00000570871 2371 ntBASIC15.83■□□□□ 0.12
SURF4O15260 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 FLJ38576-201ENST00000623820 2459 ntBASIC15.83■□□□□ 0.12
SURF4O15260 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SURF4O15260 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.82■□□□□ 0.12
SURF4O15260 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SURF4O15260 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.82■□□□□ 0.12
SURF4O15260 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 RCN1P1-201ENST00000400413 996 ntBASIC15.82■□□□□ 0.12
SURF4O15260 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.82■□□□□ 0.12
SURF4O15260 KRT18P48-201ENST00000434763 852 ntBASIC15.82■□□□□ 0.12
SURF4O15260 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SURF4O15260 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SURF4O15260 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.82■□□□□ 0.12
SURF4O15260 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.82■□□□□ 0.12
SURF4O15260 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.82■□□□□ 0.12
SURF4O15260 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.82■□□□□ 0.12
SURF4O15260 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.82■□□□□ 0.12
SURF4O15260 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.82■□□□□ 0.12
SURF4O15260 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.82■□□□□ 0.12
SURF4O15260 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.82■□□□□ 0.12
SURF4O15260 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 LINC02012-201ENST00000608206 1725 ntBASIC15.82■□□□□ 0.12
SURF4O15260 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SURF4O15260 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SURF4O15260 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.81■□□□□ 0.12
SURF4O15260 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.81■□□□□ 0.12
SURF4O15260 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SURF4O15260 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.81■□□□□ 0.12
SURF4O15260 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SURF4O15260 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms