Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 NTF6B-201ENST00000591913 560 ntBASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 BX276092.7-203ENST00000637198 1536 ntBASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRGV4A0A0C4DH28 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 KRT8P47-201ENST00000604727 1398 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 BX276092.5-203ENST00000456199 560 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC068472.1-201ENST00000474589 881 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 VENTXP7-201ENST00000475503 772 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AL136038.3-201ENST00000561909 1096 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC011840.4-201ENST00000578471 627 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC090616.6-201ENST00000582640 721 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC011498.5-201ENST00000592027 486 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AC124864.1-201ENST00000623408 392 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 AL121956.5-201ENST00000625261 221 ntBASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV4A0A0C4DH28 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV4A0A0C4DH28 LINC01451-201ENST00000623792 534 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms