Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 FAM197Y4-202ENST00000622692 608 ntBASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV18A0A075B6X5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.08■□□□□ 0.01
TRAV18A0A075B6X5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 LINC02199-201ENST00000506655 2702 ntBASIC15.08■□□□□ 0
TRAV18A0A075B6X5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 SLC25A1P2-201ENST00000430693 912 ntBASIC15.08■□□□□ 0
TRAV18A0A075B6X5 AL355355.2-201ENST00000442321 338 ntBASIC15.08■□□□□ 0
TRAV18A0A075B6X5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.08■□□□□ 0
TRAV18A0A075B6X5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.08■□□□□ 0
TRAV18A0A075B6X5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TRAV18A0A075B6X5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms