Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56-RWDD3S4R434 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56-RWDD3S4R434 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56-RWDD3S4R434 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56-RWDD3S4R434 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TMEM56-RWDD3S4R434 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56-RWDD3S4R434 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TMEM56-RWDD3S4R434 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56-RWDD3S4R434 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56-RWDD3S4R434 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56-RWDD3S4R434 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56-RWDD3S4R434 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56-RWDD3S4R434 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56-RWDD3S4R434 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56-RWDD3S4R434 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM56-RWDD3S4R434 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56-RWDD3S4R434 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56-RWDD3S4R434 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM56-RWDD3S4R434 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56-RWDD3S4R434 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.84■□□□□ 0.77
TMEM56-RWDD3S4R434 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM56-RWDD3S4R434 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56-RWDD3S4R434 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56-RWDD3S4R434 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56-RWDD3S4R434 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56-RWDD3S4R434 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56-RWDD3S4R434 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM56-RWDD3S4R434 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.83■□□□□ 0.76
TMEM56-RWDD3S4R434 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TMEM56-RWDD3S4R434 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TMEM56-RWDD3S4R434 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM56-RWDD3S4R434 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM56-RWDD3S4R434 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM56-RWDD3S4R434 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEM56-RWDD3S4R434 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM56-RWDD3S4R434 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 AC096887.2-201ENST00000623443 1957 ntBASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM56-RWDD3S4R434 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.79■□□□□ 0.76
TMEM56-RWDD3S4R434 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM56-RWDD3S4R434 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM56-RWDD3S4R434 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM56-RWDD3S4R434 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM56-RWDD3S4R434 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM56-RWDD3S4R434 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM56-RWDD3S4R434 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM56-RWDD3S4R434 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM56-RWDD3S4R434 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM56-RWDD3S4R434 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM56-RWDD3S4R434 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.77■□□□□ 0.76
TMEM56-RWDD3S4R434 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM56-RWDD3S4R434 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM56-RWDD3S4R434 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM56-RWDD3S4R434 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM56-RWDD3S4R434 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM56-RWDD3S4R434 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TMEM56-RWDD3S4R434 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM56-RWDD3S4R434 AP006261.1-201ENST00000584783 668 ntBASIC19.75■□□□□ 0.75
TMEM56-RWDD3S4R434 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM56-RWDD3S4R434 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
TMEM56-RWDD3S4R434 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TMEM56-RWDD3S4R434 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms