Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS1Q9Y6A9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SPCS1Q9Y6A9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SPCS1Q9Y6A9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS1Q9Y6A9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS1Q9Y6A9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS1Q9Y6A9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 SLC25A24-204ENST00000569674 2357 ntBASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SPCS1Q9Y6A9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 AC092803.2-201ENST00000564287 1899 ntBASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SPCS1Q9Y6A9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 AL139125.2-201ENST00000623134 1869 ntBASIC16.8■□□□□ 0.28
SPCS1Q9Y6A9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPCS1Q9Y6A9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPCS1Q9Y6A9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SPCS1Q9Y6A9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS1Q9Y6A9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS1Q9Y6A9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPCS1Q9Y6A9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPCS1Q9Y6A9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPCS1Q9Y6A9 AC142381.3-201ENST00000568208 1670 ntBASIC16.76■□□□□ 0.27
SPCS1Q9Y6A9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.76■□□□□ 0.27
SPCS1Q9Y6A9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.76■□□□□ 0.27
SPCS1Q9Y6A9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SPCS1Q9Y6A9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS1Q9Y6A9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SPCS1Q9Y6A9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS1Q9Y6A9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS1Q9Y6A9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS1Q9Y6A9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS1Q9Y6A9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SPCS1Q9Y6A9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS1Q9Y6A9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS1Q9Y6A9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS1Q9Y6A9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms