Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHGC4Q9Y5F7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PCDHGC4Q9Y5F7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGC4Q9Y5F7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHGC4Q9Y5F7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
PCDHGC4Q9Y5F7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC4Q9Y5F7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC4Q9Y5F7 AC093536.1-201ENST00000569153 554 ntBASIC24.65■■□□□ 1.54
PCDHGC4Q9Y5F7 ABHD17AP5-201ENST00000580133 923 ntBASIC24.65■■□□□ 1.54
PCDHGC4Q9Y5F7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC4Q9Y5F7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC4Q9Y5F7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC4Q9Y5F7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHGC4Q9Y5F7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGC4Q9Y5F7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGC4Q9Y5F7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
PCDHGC4Q9Y5F7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
PCDHGC4Q9Y5F7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDHGC4Q9Y5F7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
PCDHGC4Q9Y5F7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
PCDHGC4Q9Y5F7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGC4Q9Y5F7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 AC026202.3-201ENST00000600805 1127 ntBASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC4Q9Y5F7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHGC4Q9Y5F7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC4Q9Y5F7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDHGC4Q9Y5F7 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHGC4Q9Y5F7 U85056.1-201ENST00000616429 682 ntBASIC24.6■■□□□ 1.53
PCDHGC4Q9Y5F7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC4Q9Y5F7 AC009831.1-201ENST00000580420 1582 ntBASIC24.59■■□□□ 1.53
PCDHGC4Q9Y5F7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC4Q9Y5F7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHGC4Q9Y5F7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC4Q9Y5F7 AC133552.2-201ENST00000619106 1032 ntBASIC24.59■■□□□ 1.53
PCDHGC4Q9Y5F7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC4Q9Y5F7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PCDHGC4Q9Y5F7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC4Q9Y5F7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC4Q9Y5F7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC4Q9Y5F7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.58■■□□□ 1.52
PCDHGC4Q9Y5F7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC4Q9Y5F7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHGC4Q9Y5F7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC4Q9Y5F7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHGC4Q9Y5F7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC4Q9Y5F7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC4Q9Y5F7 RAP2CP1-202ENST00000605179 643 ntBASIC24.56■■□□□ 1.52
PCDHGC4Q9Y5F7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC4Q9Y5F7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PCDHGC4Q9Y5F7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC4Q9Y5F7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PCDHGC4Q9Y5F7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PCDHGC4Q9Y5F7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGC4Q9Y5F7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHGC4Q9Y5F7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHGC4Q9Y5F7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHGC4Q9Y5F7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.54■■□□□ 1.52
PCDHGC4Q9Y5F7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PCDHGC4Q9Y5F7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC4Q9Y5F7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC4Q9Y5F7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC4Q9Y5F7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 NTF6A-201ENST00000591175 560 ntBASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHGC4Q9Y5F7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC4Q9Y5F7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC4Q9Y5F7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC4Q9Y5F7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC4Q9Y5F7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGC4Q9Y5F7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHGC4Q9Y5F7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGC4Q9Y5F7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
PCDHGC4Q9Y5F7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGC4Q9Y5F7 AL592293.1-201ENST00000502889 1188 ntBASIC24.51■■□□□ 1.51
PCDHGC4Q9Y5F7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGC4Q9Y5F7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGC4Q9Y5F7 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.5■■□□□ 1.51
PCDHGC4Q9Y5F7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PCDHGC4Q9Y5F7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms