Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.32■■□□□ 1
COMMD3Q9UBI1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3Q9UBI1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COMMD3Q9UBI1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3Q9UBI1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3Q9UBI1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
COMMD3Q9UBI1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD3Q9UBI1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.31■■□□□ 1
COMMD3Q9UBI1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD3Q9UBI1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
COMMD3Q9UBI1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
COMMD3Q9UBI1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.3■■□□□ 1
COMMD3Q9UBI1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3Q9UBI1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3Q9UBI1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.3■■□□□ 1
COMMD3Q9UBI1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.3■■□□□ 1
COMMD3Q9UBI1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3Q9UBI1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3Q9UBI1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
COMMD3Q9UBI1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD3Q9UBI1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD3Q9UBI1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.29■■□□□ 1
COMMD3Q9UBI1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD3Q9UBI1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.29■■□□□ 1
COMMD3Q9UBI1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD3Q9UBI1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD3Q9UBI1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.29■■□□□ 1
COMMD3Q9UBI1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.28■■□□□ 1
COMMD3Q9UBI1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.28■■□□□ 1
COMMD3Q9UBI1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COMMD3Q9UBI1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.28■■□□□ 1
COMMD3Q9UBI1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COMMD3Q9UBI1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.28■■□□□ 1
COMMD3Q9UBI1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COMMD3Q9UBI1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COMMD3Q9UBI1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.27■■□□□ 1
COMMD3Q9UBI1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.27■■□□□ 1
COMMD3Q9UBI1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.27■■□□□ 1
COMMD3Q9UBI1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.27■■□□□ 1
COMMD3Q9UBI1 AC012676.1-201ENST00000574705 1949 ntBASIC21.27■■□□□ 1
COMMD3Q9UBI1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
COMMD3Q9UBI1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD3Q9UBI1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.25■□□□□ 0.99
COMMD3Q9UBI1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COMMD3Q9UBI1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD3Q9UBI1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD3Q9UBI1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD3Q9UBI1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD3Q9UBI1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD3Q9UBI1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD3Q9UBI1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.22■□□□□ 0.99
COMMD3Q9UBI1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COMMD3Q9UBI1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.22■□□□□ 0.99
COMMD3Q9UBI1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 SETD8P1-201ENST00000623146 1180 ntBASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3Q9UBI1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
COMMD3Q9UBI1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
COMMD3Q9UBI1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.2■□□□□ 0.98
COMMD3Q9UBI1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3Q9UBI1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3Q9UBI1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3Q9UBI1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3Q9UBI1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD3Q9UBI1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD3Q9UBI1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.19■□□□□ 0.98
COMMD3Q9UBI1 AL391121.1-201ENST00000607967 1349 ntBASIC21.19■□□□□ 0.98
COMMD3Q9UBI1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD3Q9UBI1 WHAMMP3-201ENST00000611636 1609 ntBASIC21.18■□□□□ 0.98
COMMD3Q9UBI1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3Q9UBI1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.18■□□□□ 0.98
COMMD3Q9UBI1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
COMMD3Q9UBI1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms