Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 ABHD17AP5-201ENST00000580133 923 ntBASIC22.3■■□□□ 1.16
PPP4R1LQ9P1A2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R1LQ9P1A2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP4R1LQ9P1A2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PPP4R1LQ9P1A2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R1LQ9P1A2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP4R1LQ9P1A2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP4R1LQ9P1A2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.29■■□□□ 1.16
PPP4R1LQ9P1A2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.29■■□□□ 1.16
PPP4R1LQ9P1A2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP4R1LQ9P1A2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R1LQ9P1A2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PPP4R1LQ9P1A2 AC093536.1-201ENST00000569153 554 ntBASIC22.28■■□□□ 1.16
PPP4R1LQ9P1A2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R1LQ9P1A2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R1LQ9P1A2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP4R1LQ9P1A2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP4R1LQ9P1A2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PPP4R1LQ9P1A2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PPP4R1LQ9P1A2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PPP4R1LQ9P1A2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPP4R1LQ9P1A2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.26■■□□□ 1.15
PPP4R1LQ9P1A2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP4R1LQ9P1A2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPP4R1LQ9P1A2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PPP4R1LQ9P1A2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.25■■□□□ 1.15
PPP4R1LQ9P1A2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.25■■□□□ 1.15
PPP4R1LQ9P1A2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PPP4R1LQ9P1A2 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.25■■□□□ 1.15
PPP4R1LQ9P1A2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PPP4R1LQ9P1A2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PPP4R1LQ9P1A2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
PPP4R1LQ9P1A2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.23■■□□□ 1.15
PPP4R1LQ9P1A2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PPP4R1LQ9P1A2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPP4R1LQ9P1A2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.23■■□□□ 1.15
PPP4R1LQ9P1A2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.22■■□□□ 1.15
PPP4R1LQ9P1A2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R1LQ9P1A2 AC026202.3-201ENST00000600805 1127 ntBASIC22.21■■□□□ 1.15
PPP4R1LQ9P1A2 AC133552.2-201ENST00000619106 1032 ntBASIC22.21■■□□□ 1.15
PPP4R1LQ9P1A2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R1LQ9P1A2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R1LQ9P1A2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R1LQ9P1A2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.2■■□□□ 1.14
PPP4R1LQ9P1A2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.2■■□□□ 1.14
PPP4R1LQ9P1A2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R1LQ9P1A2 AC009831.1-201ENST00000580420 1582 ntBASIC22.2■■□□□ 1.14
PPP4R1LQ9P1A2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R1LQ9P1A2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R1LQ9P1A2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R1LQ9P1A2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 U85056.1-201ENST00000616429 682 ntBASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PPP4R1LQ9P1A2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R1LQ9P1A2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R1LQ9P1A2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R1LQ9P1A2 NTF6A-201ENST00000591175 560 ntBASIC22.17■■□□□ 1.14
PPP4R1LQ9P1A2 RAP2CP1-202ENST00000605179 643 ntBASIC22.17■■□□□ 1.14
PPP4R1LQ9P1A2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R1LQ9P1A2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R1LQ9P1A2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R1LQ9P1A2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R1LQ9P1A2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R1LQ9P1A2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PPP4R1LQ9P1A2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R1LQ9P1A2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.16■■□□□ 1.14
PPP4R1LQ9P1A2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.16■■□□□ 1.14
PPP4R1LQ9P1A2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R1LQ9P1A2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R1LQ9P1A2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R1LQ9P1A2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R1LQ9P1A2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R1LQ9P1A2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R1LQ9P1A2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
PPP4R1LQ9P1A2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R1LQ9P1A2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R1LQ9P1A2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms