Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ECHDC1Q9NTX5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ECHDC1Q9NTX5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ECHDC1Q9NTX5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.86■■■□□ 2.37
ECHDC1Q9NTX5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
ECHDC1Q9NTX5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ECHDC1Q9NTX5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ECHDC1Q9NTX5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ECHDC1Q9NTX5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.85■■■□□ 2.37
ECHDC1Q9NTX5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.85■■■□□ 2.37
ECHDC1Q9NTX5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ECHDC1Q9NTX5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ECHDC1Q9NTX5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.84■■■□□ 2.37
ECHDC1Q9NTX5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ECHDC1Q9NTX5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ECHDC1Q9NTX5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.83■■■□□ 2.37
ECHDC1Q9NTX5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
ECHDC1Q9NTX5 RARRES2P2-201ENST00000394842 485 ntBASIC29.83■■■□□ 2.37
ECHDC1Q9NTX5 MIR3960-201ENST00000583311 91 ntBASIC29.83■■■□□ 2.37
ECHDC1Q9NTX5 AC007029.1-201ENST00000604183 313 ntBASIC29.83■■■□□ 2.37
ECHDC1Q9NTX5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ECHDC1Q9NTX5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ECHDC1Q9NTX5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.82■■■□□ 2.36
ECHDC1Q9NTX5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
ECHDC1Q9NTX5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
ECHDC1Q9NTX5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
ECHDC1Q9NTX5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ECHDC1Q9NTX5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ECHDC1Q9NTX5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
ECHDC1Q9NTX5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.79■■■□□ 2.36
ECHDC1Q9NTX5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
ECHDC1Q9NTX5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
ECHDC1Q9NTX5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ECHDC1Q9NTX5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
ECHDC1Q9NTX5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.78■■■□□ 2.36
ECHDC1Q9NTX5 RP9P-202ENST00000450133 1212 ntBASIC29.78■■■□□ 2.36
ECHDC1Q9NTX5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ECHDC1Q9NTX5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.78■■■□□ 2.36
ECHDC1Q9NTX5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ECHDC1Q9NTX5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
ECHDC1Q9NTX5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
ECHDC1Q9NTX5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.77■■■□□ 2.36
ECHDC1Q9NTX5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.76■■■□□ 2.35
ECHDC1Q9NTX5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ECHDC1Q9NTX5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
ECHDC1Q9NTX5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ECHDC1Q9NTX5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ECHDC1Q9NTX5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.75■■■□□ 2.35
ECHDC1Q9NTX5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
ECHDC1Q9NTX5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.75■■■□□ 2.35
ECHDC1Q9NTX5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.74■■■□□ 2.35
ECHDC1Q9NTX5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ECHDC1Q9NTX5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ECHDC1Q9NTX5 AC093536.1-201ENST00000569153 554 ntBASIC29.74■■■□□ 2.35
ECHDC1Q9NTX5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ECHDC1Q9NTX5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ECHDC1Q9NTX5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
ECHDC1Q9NTX5 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.72■■■□□ 2.35
ECHDC1Q9NTX5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ECHDC1Q9NTX5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.71■■■□□ 2.35
ECHDC1Q9NTX5 AC091060.1-201ENST00000623524 1766 ntBASIC29.71■■■□□ 2.35
ECHDC1Q9NTX5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ECHDC1Q9NTX5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.71■■■□□ 2.35
ECHDC1Q9NTX5 AC092803.2-201ENST00000564287 1899 ntBASIC29.7■■■□□ 2.35
ECHDC1Q9NTX5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
ECHDC1Q9NTX5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.7■■■□□ 2.34
ECHDC1Q9NTX5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.69■■■□□ 2.34
ECHDC1Q9NTX5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ECHDC1Q9NTX5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
ECHDC1Q9NTX5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ECHDC1Q9NTX5 AC026202.3-201ENST00000600805 1127 ntBASIC29.68■■■□□ 2.34
ECHDC1Q9NTX5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.68■■■□□ 2.34
ECHDC1Q9NTX5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ECHDC1Q9NTX5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ECHDC1Q9NTX5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.66■■■□□ 2.34
ECHDC1Q9NTX5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
ECHDC1Q9NTX5 RAP2CP1-202ENST00000605179 643 ntBASIC29.66■■■□□ 2.34
ECHDC1Q9NTX5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
ECHDC1Q9NTX5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC29.66■■■□□ 2.34
ECHDC1Q9NTX5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.65■■■□□ 2.34
ECHDC1Q9NTX5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.65■■■□□ 2.34
ECHDC1Q9NTX5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ECHDC1Q9NTX5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ECHDC1Q9NTX5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.64■■■□□ 2.34
ECHDC1Q9NTX5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ECHDC1Q9NTX5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.64■■■□□ 2.34
ECHDC1Q9NTX5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.64■■■□□ 2.33
ECHDC1Q9NTX5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.64■■■□□ 2.33
ECHDC1Q9NTX5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ECHDC1Q9NTX5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ECHDC1Q9NTX5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
ECHDC1Q9NTX5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms