Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MIR3648-2-201ENST00000581792 180 ntBASIC21.95■■□□□ 1.1
HINT3Q9NQE9 MIR3648-1-201ENST00000615959 180 ntBASIC21.95■■□□□ 1.1
HINT3Q9NQE9 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.95■■□□□ 1.1
HINT3Q9NQE9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HINT3Q9NQE9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HINT3Q9NQE9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HINT3Q9NQE9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HINT3Q9NQE9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
HINT3Q9NQE9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HINT3Q9NQE9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
HINT3Q9NQE9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.93■■□□□ 1.1
HINT3Q9NQE9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HINT3Q9NQE9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HINT3Q9NQE9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.93■■□□□ 1.1
HINT3Q9NQE9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 AC016575.1-201ENST00000607026 382 ntBASIC21.92■■□□□ 1.1
HINT3Q9NQE9 CR559946.2-201ENST00000623684 991 ntBASIC21.92■■□□□ 1.1
HINT3Q9NQE9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HINT3Q9NQE9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HINT3Q9NQE9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HINT3Q9NQE9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HINT3Q9NQE9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HINT3Q9NQE9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.91■■□□□ 1.1
HINT3Q9NQE9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HINT3Q9NQE9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HINT3Q9NQE9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HINT3Q9NQE9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HINT3Q9NQE9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HINT3Q9NQE9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.9■■□□□ 1.1
HINT3Q9NQE9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HINT3Q9NQE9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HINT3Q9NQE9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HINT3Q9NQE9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HINT3Q9NQE9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HINT3Q9NQE9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
HINT3Q9NQE9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HINT3Q9NQE9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HINT3Q9NQE9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HINT3Q9NQE9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.88■■□□□ 1.09
HINT3Q9NQE9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.88■■□□□ 1.09
HINT3Q9NQE9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HINT3Q9NQE9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.88■■□□□ 1.09
HINT3Q9NQE9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.87■■□□□ 1.09
HINT3Q9NQE9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.87■■□□□ 1.09
HINT3Q9NQE9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 MIR639-201ENST00000384974 98 ntBASIC21.86■■□□□ 1.09
HINT3Q9NQE9 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HINT3Q9NQE9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
HINT3Q9NQE9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HINT3Q9NQE9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HINT3Q9NQE9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.85■■□□□ 1.09
HINT3Q9NQE9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HINT3Q9NQE9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HINT3Q9NQE9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.84■■□□□ 1.09
HINT3Q9NQE9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HINT3Q9NQE9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HINT3Q9NQE9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.83■■□□□ 1.09
HINT3Q9NQE9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HINT3Q9NQE9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.83■■□□□ 1.09
HINT3Q9NQE9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HINT3Q9NQE9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HINT3Q9NQE9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HINT3Q9NQE9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HINT3Q9NQE9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.82■■□□□ 1.08
HINT3Q9NQE9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
HINT3Q9NQE9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HINT3Q9NQE9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HINT3Q9NQE9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HINT3Q9NQE9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
HINT3Q9NQE9 AC142381.3-201ENST00000568208 1670 ntBASIC21.81■■□□□ 1.08
HINT3Q9NQE9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HINT3Q9NQE9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
HINT3Q9NQE9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HINT3Q9NQE9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HINT3Q9NQE9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms