Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.71■□□□□ 0.91
GCM1Q9NP62 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCM1Q9NP62 AL121749.1-202ENST00000609313 2153 ntBASIC20.7■□□□□ 0.91
GCM1Q9NP62 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GCM1Q9NP62 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GCM1Q9NP62 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCM1Q9NP62 MIR3960-201ENST00000583311 91 ntBASIC20.7■□□□□ 0.9
GCM1Q9NP62 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCM1Q9NP62 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GCM1Q9NP62 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCM1Q9NP62 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCM1Q9NP62 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
GCM1Q9NP62 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.69■□□□□ 0.9
GCM1Q9NP62 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GCM1Q9NP62 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GCM1Q9NP62 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.68■□□□□ 0.9
GCM1Q9NP62 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GCM1Q9NP62 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
GCM1Q9NP62 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GCM1Q9NP62 RP9P-202ENST00000450133 1212 ntBASIC20.68■□□□□ 0.9
GCM1Q9NP62 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.68■□□□□ 0.9
GCM1Q9NP62 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GCM1Q9NP62 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GCM1Q9NP62 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GCM1Q9NP62 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
GCM1Q9NP62 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.67■□□□□ 0.9
GCM1Q9NP62 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.67■□□□□ 0.9
GCM1Q9NP62 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GCM1Q9NP62 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.67■□□□□ 0.9
GCM1Q9NP62 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GCM1Q9NP62 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GCM1Q9NP62 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GCM1Q9NP62 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GCM1Q9NP62 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GCM1Q9NP62 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GCM1Q9NP62 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GCM1Q9NP62 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
GCM1Q9NP62 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GCM1Q9NP62 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GCM1Q9NP62 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GCM1Q9NP62 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GCM1Q9NP62 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.65■□□□□ 0.9
GCM1Q9NP62 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.65■□□□□ 0.9
GCM1Q9NP62 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GCM1Q9NP62 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GCM1Q9NP62 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.65■□□□□ 0.9
GCM1Q9NP62 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.65■□□□□ 0.9
GCM1Q9NP62 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.65■□□□□ 0.9
GCM1Q9NP62 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.65■□□□□ 0.9
GCM1Q9NP62 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
GCM1Q9NP62 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GCM1Q9NP62 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GCM1Q9NP62 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GCM1Q9NP62 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.64■□□□□ 0.89
GCM1Q9NP62 AC093536.1-201ENST00000569153 554 ntBASIC20.64■□□□□ 0.89
GCM1Q9NP62 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.64■□□□□ 0.89
GCM1Q9NP62 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GCM1Q9NP62 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GCM1Q9NP62 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GCM1Q9NP62 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.63■□□□□ 0.89
GCM1Q9NP62 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
GCM1Q9NP62 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GCM1Q9NP62 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GCM1Q9NP62 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GCM1Q9NP62 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GCM1Q9NP62 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GCM1Q9NP62 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GCM1Q9NP62 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GCM1Q9NP62 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GCM1Q9NP62 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GCM1Q9NP62 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GCM1Q9NP62 AC026202.3-201ENST00000600805 1127 ntBASIC20.61■□□□□ 0.89
GCM1Q9NP62 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
GCM1Q9NP62 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GCM1Q9NP62 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GCM1Q9NP62 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GCM1Q9NP62 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GCM1Q9NP62 NTF6A-201ENST00000591175 560 ntBASIC20.6■□□□□ 0.89
GCM1Q9NP62 U85056.1-201ENST00000616429 682 ntBASIC20.6■□□□□ 0.89
GCM1Q9NP62 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GCM1Q9NP62 AC009831.1-201ENST00000580420 1582 ntBASIC20.59■□□□□ 0.89
GCM1Q9NP62 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
GCM1Q9NP62 AC133552.2-201ENST00000619106 1032 ntBASIC20.59■□□□□ 0.89
GCM1Q9NP62 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GCM1Q9NP62 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
GCM1Q9NP62 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.58■□□□□ 0.89
GCM1Q9NP62 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
GCM1Q9NP62 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GCM1Q9NP62 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GCM1Q9NP62 RAP2CP1-202ENST00000605179 643 ntBASIC20.58■□□□□ 0.89
GCM1Q9NP62 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.58■□□□□ 0.88
GCM1Q9NP62 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.57■□□□□ 0.88
GCM1Q9NP62 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCM1Q9NP62 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GCM1Q9NP62 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCM1Q9NP62 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GCM1Q9NP62 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GCM1Q9NP62 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.57■□□□□ 0.88
GCM1Q9NP62 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.57■□□□□ 0.88
GCM1Q9NP62 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms