Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 AC138932.3-201ENST00000567634 1902 ntBASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 WHAMMP2-203ENST00000563942 1603 ntBASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCRT1Q9BWW7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCRT1Q9BWW7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SCRT1Q9BWW7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCRT1Q9BWW7 AC108673.1-201ENST00000510422 1159 ntBASIC19.43■□□□□ 0.7
SCRT1Q9BWW7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.43■□□□□ 0.7
SCRT1Q9BWW7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT1Q9BWW7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT1Q9BWW7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT1Q9BWW7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT1Q9BWW7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT1Q9BWW7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCRT1Q9BWW7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 MIR6090-201ENST00000622481 60 ntBASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCRT1Q9BWW7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCRT1Q9BWW7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCRT1Q9BWW7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 AP004609.3-201ENST00000610705 1884 ntBASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 AC022211.4-201ENST00000625094 2161 ntBASIC19.38■□□□□ 0.69
SCRT1Q9BWW7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 LINC00273-201ENST00000539813 1452 ntBASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 DUX4L28-201ENST00000623687 678 ntBASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.37■□□□□ 0.69
SCRT1Q9BWW7 RPS2P35-201ENST00000443417 897 ntBASIC19.36■□□□□ 0.69
SCRT1Q9BWW7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCRT1Q9BWW7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCRT1Q9BWW7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCRT1Q9BWW7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCRT1Q9BWW7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.35■□□□□ 0.69
SCRT1Q9BWW7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCRT1Q9BWW7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.35■□□□□ 0.69
SCRT1Q9BWW7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCRT1Q9BWW7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT1Q9BWW7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCRT1Q9BWW7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCRT1Q9BWW7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.33■□□□□ 0.68
SCRT1Q9BWW7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCRT1Q9BWW7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms