Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
HDHD3Q9BSH5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDHD3Q9BSH5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HDHD3Q9BSH5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.47■□□□□ 0.87
HDHD3Q9BSH5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HDHD3Q9BSH5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.47■□□□□ 0.87
HDHD3Q9BSH5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDHD3Q9BSH5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDHD3Q9BSH5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.46■□□□□ 0.87
HDHD3Q9BSH5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.46■□□□□ 0.87
HDHD3Q9BSH5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.46■□□□□ 0.87
HDHD3Q9BSH5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDHD3Q9BSH5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDHD3Q9BSH5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.45■□□□□ 0.86
HDHD3Q9BSH5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HDHD3Q9BSH5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDHD3Q9BSH5 LINC01971-201ENST00000617888 1048 ntBASIC20.45■□□□□ 0.86
HDHD3Q9BSH5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HDHD3Q9BSH5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HDHD3Q9BSH5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HDHD3Q9BSH5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 RPS2P35-201ENST00000443417 897 ntBASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 MIR219A2-201ENST00000608502 1504 ntBASIC20.43■□□□□ 0.86
HDHD3Q9BSH5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L13-201ENST00000554103 1267 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L15-201ENST00000611059 1267 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L23-201ENST00000615195 1269 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L24-201ENST00000617576 1269 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L22-201ENST00000618238 1269 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L20-201ENST00000619712 1269 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L21-201ENST00000622058 1269 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L10-201ENST00000622460 1267 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 DUX4L25-201ENST00000624915 1269 ntBASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.42■□□□□ 0.86
HDHD3Q9BSH5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
HDHD3Q9BSH5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.41■□□□□ 0.86
HDHD3Q9BSH5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.41■□□□□ 0.86
HDHD3Q9BSH5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDHD3Q9BSH5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HDHD3Q9BSH5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HDHD3Q9BSH5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HDHD3Q9BSH5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
HDHD3Q9BSH5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HDHD3Q9BSH5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HDHD3Q9BSH5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
HDHD3Q9BSH5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HDHD3Q9BSH5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.39■□□□□ 0.86
HDHD3Q9BSH5 AC096887.2-201ENST00000623443 1957 ntBASIC20.39■□□□□ 0.86
HDHD3Q9BSH5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HDHD3Q9BSH5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
HDHD3Q9BSH5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.39■□□□□ 0.85
HDHD3Q9BSH5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HDHD3Q9BSH5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDHD3Q9BSH5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HDHD3Q9BSH5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
HDHD3Q9BSH5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDHD3Q9BSH5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDHD3Q9BSH5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDHD3Q9BSH5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDHD3Q9BSH5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDHD3Q9BSH5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDHD3Q9BSH5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HDHD3Q9BSH5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDHD3Q9BSH5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.37■□□□□ 0.85
HDHD3Q9BSH5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HDHD3Q9BSH5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HDHD3Q9BSH5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDHD3Q9BSH5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HDHD3Q9BSH5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HDHD3Q9BSH5 AC142381.3-201ENST00000568208 1670 ntBASIC20.36■□□□□ 0.85
HDHD3Q9BSH5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HDHD3Q9BSH5 AC008813.1-201ENST00000536597 885 ntBASIC20.36■□□□□ 0.85
HDHD3Q9BSH5 AC022211.4-201ENST00000625094 2161 ntBASIC20.36■□□□□ 0.85
HDHD3Q9BSH5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.36■□□□□ 0.85
HDHD3Q9BSH5 AC138932.3-201ENST00000567634 1902 ntBASIC20.35■□□□□ 0.85
HDHD3Q9BSH5 HLA-V-202ENST00000446817 847 ntBASIC20.35■□□□□ 0.85
HDHD3Q9BSH5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.35■□□□□ 0.85
HDHD3Q9BSH5 DUX4L11-201ENST00000611504 1267 ntBASIC20.35■□□□□ 0.85
HDHD3Q9BSH5 DUX4L12-201ENST00000614593 1267 ntBASIC20.35■□□□□ 0.85
HDHD3Q9BSH5 DUX4L14-201ENST00000621227 1267 ntBASIC20.35■□□□□ 0.85
HDHD3Q9BSH5 AC148477.6-201ENST00000623746 465 ntBASIC20.35■□□□□ 0.85
HDHD3Q9BSH5 AL359258.2-201ENST00000564063 1566 ntBASIC20.34■□□□□ 0.85
HDHD3Q9BSH5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HDHD3Q9BSH5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDHD3Q9BSH5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.34■□□□□ 0.85
HDHD3Q9BSH5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HDHD3Q9BSH5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.34■□□□□ 0.85
HDHD3Q9BSH5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms