Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VGLL1Q99990 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VGLL1Q99990 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.31■□□□□ 0.52
VGLL1Q99990 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VGLL1Q99990 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VGLL1Q99990 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VGLL1Q99990 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.31■□□□□ 0.52
VGLL1Q99990 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VGLL1Q99990 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.31■□□□□ 0.52
VGLL1Q99990 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VGLL1Q99990 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.3■□□□□ 0.52
VGLL1Q99990 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.3■□□□□ 0.52
VGLL1Q99990 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.3■□□□□ 0.52
VGLL1Q99990 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VGLL1Q99990 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VGLL1Q99990 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VGLL1Q99990 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VGLL1Q99990 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.29■□□□□ 0.52
VGLL1Q99990 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VGLL1Q99990 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VGLL1Q99990 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VGLL1Q99990 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VGLL1Q99990 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VGLL1Q99990 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
VGLL1Q99990 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.28■□□□□ 0.52
VGLL1Q99990 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
VGLL1Q99990 AC093323.1-202ENST00000635031 2045 ntBASIC18.28■□□□□ 0.52
VGLL1Q99990 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VGLL1Q99990 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VGLL1Q99990 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VGLL1Q99990 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.27■□□□□ 0.52
VGLL1Q99990 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VGLL1Q99990 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VGLL1Q99990 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.27■□□□□ 0.51
VGLL1Q99990 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VGLL1Q99990 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
VGLL1Q99990 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VGLL1Q99990 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VGLL1Q99990 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VGLL1Q99990 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
VGLL1Q99990 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.26■□□□□ 0.51
VGLL1Q99990 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VGLL1Q99990 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.26■□□□□ 0.51
VGLL1Q99990 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.26■□□□□ 0.51
VGLL1Q99990 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VGLL1Q99990 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VGLL1Q99990 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VGLL1Q99990 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VGLL1Q99990 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VGLL1Q99990 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VGLL1Q99990 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VGLL1Q99990 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VGLL1Q99990 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VGLL1Q99990 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
VGLL1Q99990 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VGLL1Q99990 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VGLL1Q99990 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VGLL1Q99990 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VGLL1Q99990 LINC01971-201ENST00000617888 1048 ntBASIC18.24■□□□□ 0.51
VGLL1Q99990 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VGLL1Q99990 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VGLL1Q99990 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VGLL1Q99990 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.23■□□□□ 0.51
VGLL1Q99990 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VGLL1Q99990 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VGLL1Q99990 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VGLL1Q99990 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VGLL1Q99990 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VGLL1Q99990 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.23■□□□□ 0.51
VGLL1Q99990 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VGLL1Q99990 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.23■□□□□ 0.51
VGLL1Q99990 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.23■□□□□ 0.51
VGLL1Q99990 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
VGLL1Q99990 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VGLL1Q99990 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.22■□□□□ 0.51
VGLL1Q99990 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.22■□□□□ 0.51
VGLL1Q99990 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VGLL1Q99990 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VGLL1Q99990 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VGLL1Q99990 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.21■□□□□ 0.51
VGLL1Q99990 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.21■□□□□ 0.51
VGLL1Q99990 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L13-201ENST00000554103 1267 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L15-201ENST00000611059 1267 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L23-201ENST00000615195 1269 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L24-201ENST00000617576 1269 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L22-201ENST00000618238 1269 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L20-201ENST00000619712 1269 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L21-201ENST00000622058 1269 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L10-201ENST00000622460 1267 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 DUX4L25-201ENST00000624915 1269 ntBASIC18.21■□□□□ 0.51
VGLL1Q99990 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VGLL1Q99990 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL1Q99990 MIR219A2-201ENST00000608502 1504 ntBASIC18.2■□□□□ 0.5
VGLL1Q99990 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL1Q99990 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.2■□□□□ 0.5
VGLL1Q99990 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.2■□□□□ 0.5
VGLL1Q99990 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL1Q99990 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL1Q99990 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms