Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.41■□□□□ 0.86
CCL13Q99616 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.41■□□□□ 0.86
CCL13Q99616 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCL13Q99616 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCL13Q99616 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL13Q99616 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL13Q99616 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.4■□□□□ 0.86
CCL13Q99616 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CCL13Q99616 MIR3960-201ENST00000583311 91 ntBASIC20.4■□□□□ 0.86
CCL13Q99616 AC007029.1-201ENST00000604183 313 ntBASIC20.4■□□□□ 0.86
CCL13Q99616 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL13Q99616 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL13Q99616 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CCL13Q99616 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.39■□□□□ 0.85
CCL13Q99616 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCL13Q99616 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCL13Q99616 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.39■□□□□ 0.85
CCL13Q99616 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCL13Q99616 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCL13Q99616 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCL13Q99616 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.38■□□□□ 0.85
CCL13Q99616 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCL13Q99616 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL13Q99616 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCL13Q99616 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CCL13Q99616 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL13Q99616 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCL13Q99616 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL13Q99616 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.37■□□□□ 0.85
CCL13Q99616 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL13Q99616 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCL13Q99616 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCL13Q99616 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL13Q99616 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCL13Q99616 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL13Q99616 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL13Q99616 RP9P-202ENST00000450133 1212 ntBASIC20.36■□□□□ 0.85
CCL13Q99616 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCL13Q99616 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL13Q99616 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CCL13Q99616 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.35■□□□□ 0.85
CCL13Q99616 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 AC093536.1-201ENST00000569153 554 ntBASIC20.35■□□□□ 0.85
CCL13Q99616 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL13Q99616 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL13Q99616 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCL13Q99616 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCL13Q99616 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCL13Q99616 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CCL13Q99616 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL13Q99616 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.32■□□□□ 0.84
CCL13Q99616 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.32■□□□□ 0.84
CCL13Q99616 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL13Q99616 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL13Q99616 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL13Q99616 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCL13Q99616 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.32■□□□□ 0.84
CCL13Q99616 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCL13Q99616 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCL13Q99616 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCL13Q99616 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCL13Q99616 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCL13Q99616 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCL13Q99616 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.31■□□□□ 0.84
CCL13Q99616 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCL13Q99616 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.31■□□□□ 0.84
CCL13Q99616 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.31■□□□□ 0.84
CCL13Q99616 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CCL13Q99616 ABHD17AP5-201ENST00000580133 923 ntBASIC20.3■□□□□ 0.84
CCL13Q99616 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL13Q99616 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL13Q99616 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCL13Q99616 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.29■□□□□ 0.84
CCL13Q99616 AC026202.3-201ENST00000600805 1127 ntBASIC20.29■□□□□ 0.84
CCL13Q99616 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.28■□□□□ 0.84
CCL13Q99616 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.28■□□□□ 0.84
CCL13Q99616 AC133552.2-201ENST00000619106 1032 ntBASIC20.28■□□□□ 0.84
CCL13Q99616 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.28■□□□□ 0.84
CCL13Q99616 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.28■□□□□ 0.84
CCL13Q99616 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCL13Q99616 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCL13Q99616 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL13Q99616 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL13Q99616 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCL13Q99616 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL13Q99616 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL13Q99616 AC009831.1-201ENST00000580420 1582 ntBASIC20.27■□□□□ 0.84
CCL13Q99616 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCL13Q99616 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCL13Q99616 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.27■□□□□ 0.83
CCL13Q99616 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCL13Q99616 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCL13Q99616 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms