Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.98■□□□□ 0.79
S1PR3Q99500 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
S1PR3Q99500 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
S1PR3Q99500 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.97■□□□□ 0.79
S1PR3Q99500 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
S1PR3Q99500 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
S1PR3Q99500 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
S1PR3Q99500 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
S1PR3Q99500 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
S1PR3Q99500 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
S1PR3Q99500 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
S1PR3Q99500 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
S1PR3Q99500 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.96■□□□□ 0.79
S1PR3Q99500 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
S1PR3Q99500 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
S1PR3Q99500 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
S1PR3Q99500 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
S1PR3Q99500 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.95■□□□□ 0.78
S1PR3Q99500 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
S1PR3Q99500 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
S1PR3Q99500 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
S1PR3Q99500 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
S1PR3Q99500 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
S1PR3Q99500 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
S1PR3Q99500 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
S1PR3Q99500 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
S1PR3Q99500 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.93■□□□□ 0.78
S1PR3Q99500 MIR4449-201ENST00000578365 66 ntBASIC19.93■□□□□ 0.78
S1PR3Q99500 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
S1PR3Q99500 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
S1PR3Q99500 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.92■□□□□ 0.78
S1PR3Q99500 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.92■□□□□ 0.78
S1PR3Q99500 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
S1PR3Q99500 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
S1PR3Q99500 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
S1PR3Q99500 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
S1PR3Q99500 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
S1PR3Q99500 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.9■□□□□ 0.78
S1PR3Q99500 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
S1PR3Q99500 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
S1PR3Q99500 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
S1PR3Q99500 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.89■□□□□ 0.77
S1PR3Q99500 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.89■□□□□ 0.77
S1PR3Q99500 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
S1PR3Q99500 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.89■□□□□ 0.77
S1PR3Q99500 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.89■□□□□ 0.77
S1PR3Q99500 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
S1PR3Q99500 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
S1PR3Q99500 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
S1PR3Q99500 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
S1PR3Q99500 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
S1PR3Q99500 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
S1PR3Q99500 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.88■□□□□ 0.77
S1PR3Q99500 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
S1PR3Q99500 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
S1PR3Q99500 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.87■□□□□ 0.77
S1PR3Q99500 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
S1PR3Q99500 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
S1PR3Q99500 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
S1PR3Q99500 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
S1PR3Q99500 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.87■□□□□ 0.77
S1PR3Q99500 AL359504.2-201ENST00000605506 1601 ntBASIC19.87■□□□□ 0.77
S1PR3Q99500 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
S1PR3Q99500 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.86■□□□□ 0.77
S1PR3Q99500 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
S1PR3Q99500 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.86■□□□□ 0.77
S1PR3Q99500 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
S1PR3Q99500 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
S1PR3Q99500 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
S1PR3Q99500 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.85■□□□□ 0.77
S1PR3Q99500 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
S1PR3Q99500 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms