Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 AL512631.2-201ENST00000604634 923 ntBASIC7.74□□□□□ -1.17
HMCN1Q96RW7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 HLA-L-209ENST00000420110 1011 ntBASIC7.74□□□□□ -1.17
HMCN1Q96RW7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMCN1Q96RW7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 AC241377.3-202ENST00000626088 1088 ntBASIC7.73□□□□□ -1.17
HMCN1Q96RW7 AC241585.3-202ENST00000628937 1088 ntBASIC7.73□□□□□ -1.17
HMCN1Q96RW7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 PBX2P1-201ENST00000493219 1291 ntBASIC7.73□□□□□ -1.17
HMCN1Q96RW7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMCN1Q96RW7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 AC092028.1-203ENST00000608262 953 ntBASIC7.72□□□□□ -1.17
HMCN1Q96RW7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 UNC93B3-201ENST00000308076 687 ntBASIC7.72□□□□□ -1.17
HMCN1Q96RW7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC7.72□□□□□ -1.17
HMCN1Q96RW7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC7.71□□□□□ -1.17
HMCN1Q96RW7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HMCN1Q96RW7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
HMCN1Q96RW7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HMCN1Q96RW7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC7.71□□□□□ -1.17
HMCN1Q96RW7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
HMCN1Q96RW7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 AC092437.1-201ENST00000624794 1048 ntBASIC7.71□□□□□ -1.18
HMCN1Q96RW7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 AC022616.5-201ENST00000518796 181 ntBASIC7.71□□□□□ -1.18
HMCN1Q96RW7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC7.71□□□□□ -1.18
HMCN1Q96RW7 IKBKGP1-201ENST00000612193 1073 ntBASIC7.71□□□□□ -1.18
HMCN1Q96RW7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 MIR939-201ENST00000401314 82 ntBASIC7.7□□□□□ -1.18
HMCN1Q96RW7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 AC127502.1-201ENST00000399971 1502 ntBASIC7.7□□□□□ -1.18
HMCN1Q96RW7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC7.7□□□□□ -1.18
HMCN1Q96RW7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 AL136967.2-201ENST00000623968 743 ntBASIC7.69□□□□□ -1.18
HMCN1Q96RW7 AC135983.2-203ENST00000454486 1613 ntBASIC7.69□□□□□ -1.18
HMCN1Q96RW7 SLC47A1P1-202ENST00000449666 945 ntBASIC7.69□□□□□ -1.18
HMCN1Q96RW7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC7.69□□□□□ -1.18
HMCN1Q96RW7 MIR3960-201ENST00000583311 91 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms