Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 AC022211.4-201ENST00000625094 2161 ntBASIC19.93■□□□□ 0.78
TMEM56Q96MV1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56Q96MV1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 AL139125.2-201ENST00000623134 1869 ntBASIC19.91■□□□□ 0.78
TMEM56Q96MV1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.91■□□□□ 0.78
TMEM56Q96MV1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TMEM56Q96MV1 AC138932.3-201ENST00000567634 1902 ntBASIC19.9■□□□□ 0.78
TMEM56Q96MV1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM56Q96MV1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.9■□□□□ 0.78
TMEM56Q96MV1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TMEM56Q96MV1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM56Q96MV1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMEM56Q96MV1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56Q96MV1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56Q96MV1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56Q96MV1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56Q96MV1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM56Q96MV1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56Q96MV1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEM56Q96MV1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TMEM56Q96MV1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TMEM56Q96MV1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56Q96MV1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56Q96MV1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TMEM56Q96MV1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56Q96MV1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM56Q96MV1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56Q96MV1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56Q96MV1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56Q96MV1 DUX4L29-201ENST00000425409 679 ntBASIC19.85■□□□□ 0.77
TMEM56Q96MV1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM56Q96MV1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56Q96MV1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM56Q96MV1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM56Q96MV1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.84■□□□□ 0.77
TMEM56Q96MV1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.84■□□□□ 0.77
TMEM56Q96MV1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM56Q96MV1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM56Q96MV1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM56Q96MV1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56Q96MV1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56Q96MV1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56Q96MV1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56Q96MV1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56Q96MV1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM56Q96MV1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM56Q96MV1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.83■□□□□ 0.76
TMEM56Q96MV1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56Q96MV1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TMEM56Q96MV1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56Q96MV1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TMEM56Q96MV1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56Q96MV1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM56Q96MV1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TMEM56Q96MV1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TMEM56Q96MV1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM56Q96MV1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEM56Q96MV1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM56Q96MV1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM56Q96MV1 AC021231.2-201ENST00000594613 730 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms