Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTP4A1Q93096 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.85■■□□□ 1.09
PTP4A1Q93096 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A1Q93096 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A1Q93096 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A1Q93096 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A1Q93096 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTP4A1Q93096 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.84■■□□□ 1.09
PTP4A1Q93096 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTP4A1Q93096 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTP4A1Q93096 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTP4A1Q93096 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTP4A1Q93096 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTP4A1Q93096 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.83■■□□□ 1.09
PTP4A1Q93096 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PTP4A1Q93096 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTP4A1Q93096 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.82■■□□□ 1.08
PTP4A1Q93096 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.82■■□□□ 1.08
PTP4A1Q93096 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTP4A1Q93096 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.82■■□□□ 1.08
PTP4A1Q93096 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.82■■□□□ 1.08
PTP4A1Q93096 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PTP4A1Q93096 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTP4A1Q93096 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTP4A1Q93096 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PTP4A1Q93096 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTP4A1Q93096 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTP4A1Q93096 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTP4A1Q93096 AC093323.1-202ENST00000635031 2045 ntBASIC21.8■■□□□ 1.08
PTP4A1Q93096 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.8■■□□□ 1.08
PTP4A1Q93096 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.8■■□□□ 1.08
PTP4A1Q93096 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.8■■□□□ 1.08
PTP4A1Q93096 MIR7108-201ENST00000614319 87 ntBASIC21.8■■□□□ 1.08
PTP4A1Q93096 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A1Q93096 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
PTP4A1Q93096 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTP4A1Q93096 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTP4A1Q93096 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PTP4A1Q93096 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A1Q93096 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A1Q93096 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A1Q93096 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PTP4A1Q93096 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
PTP4A1Q93096 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
PTP4A1Q93096 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTP4A1Q93096 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PTP4A1Q93096 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTP4A1Q93096 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTP4A1Q93096 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTP4A1Q93096 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTP4A1Q93096 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PTP4A1Q93096 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTP4A1Q93096 MIR219A2-201ENST00000608502 1504 ntBASIC21.76■■□□□ 1.07
PTP4A1Q93096 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTP4A1Q93096 AC008813.1-201ENST00000536597 885 ntBASIC21.76■■□□□ 1.07
PTP4A1Q93096 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTP4A1Q93096 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.76■■□□□ 1.07
PTP4A1Q93096 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTP4A1Q93096 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTP4A1Q93096 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTP4A1Q93096 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PTP4A1Q93096 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.75■■□□□ 1.07
PTP4A1Q93096 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTP4A1Q93096 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.75■■□□□ 1.07
PTP4A1Q93096 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.74■■□□□ 1.07
PTP4A1Q93096 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.74■■□□□ 1.07
PTP4A1Q93096 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PTP4A1Q93096 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.74■■□□□ 1.07
PTP4A1Q93096 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A1Q93096 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A1Q93096 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
PTP4A1Q93096 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PTP4A1Q93096 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PTP4A1Q93096 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTP4A1Q93096 AC148477.6-201ENST00000623746 465 ntBASIC21.73■■□□□ 1.07
PTP4A1Q93096 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A1Q93096 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A1Q93096 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A1Q93096 MIR3648-2-201ENST00000581792 180 ntBASIC21.72■■□□□ 1.07
PTP4A1Q93096 MIR3648-1-201ENST00000615959 180 ntBASIC21.72■■□□□ 1.07
PTP4A1Q93096 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.71■■□□□ 1.07
PTP4A1Q93096 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PTP4A1Q93096 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A1Q93096 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.71■■□□□ 1.07
PTP4A1Q93096 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.71■■□□□ 1.07
PTP4A1Q93096 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PTP4A1Q93096 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A1Q93096 AC096887.2-201ENST00000623443 1957 ntBASIC21.7■■□□□ 1.07
PTP4A1Q93096 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTP4A1Q93096 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTP4A1Q93096 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms