Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.76■■■□□ 2.67
SMARCC1Q92922 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.75■■■□□ 2.67
SMARCC1Q92922 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCC1Q92922 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
SMARCC1Q92922 LONRF2P2-201ENST00000439212 571 ntBASIC31.75■■■□□ 2.67
SMARCC1Q92922 RPS2P7-201ENST00000447334 885 ntBASIC31.75■■■□□ 2.67
SMARCC1Q92922 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCC1Q92922 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.75■■■□□ 2.67
SMARCC1Q92922 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCC1Q92922 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.73■■■□□ 2.67
SMARCC1Q92922 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCC1Q92922 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
SMARCC1Q92922 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCC1Q92922 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCC1Q92922 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCC1Q92922 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCC1Q92922 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
SMARCC1Q92922 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.72■■■□□ 2.67
SMARCC1Q92922 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCC1Q92922 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCC1Q92922 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.72■■■□□ 2.67
SMARCC1Q92922 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCC1Q92922 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCC1Q92922 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCC1Q92922 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCC1Q92922 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCC1Q92922 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCC1Q92922 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCC1Q92922 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCC1Q92922 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCC1Q92922 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.7■■■□□ 2.67
SMARCC1Q92922 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
SMARCC1Q92922 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
SMARCC1Q92922 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCC1Q92922 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCC1Q92922 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCC1Q92922 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCC1Q92922 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.68■■■□□ 2.66
SMARCC1Q92922 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.68■■■□□ 2.66
SMARCC1Q92922 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCC1Q92922 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCC1Q92922 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCC1Q92922 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SMARCC1Q92922 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCC1Q92922 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCC1Q92922 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.66■■■□□ 2.66
SMARCC1Q92922 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
SMARCC1Q92922 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.65■■■□□ 2.66
SMARCC1Q92922 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCC1Q92922 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCC1Q92922 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCC1Q92922 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCC1Q92922 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.63■■■□□ 2.65
SMARCC1Q92922 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.63■■■□□ 2.65
SMARCC1Q92922 AC008406.3-201ENST00000620001 1374 ntBASIC31.63■■■□□ 2.65
SMARCC1Q92922 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCC1Q92922 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCC1Q92922 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.62■■■□□ 2.65
SMARCC1Q92922 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCC1Q92922 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.61■■■□□ 2.65
SMARCC1Q92922 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCC1Q92922 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCC1Q92922 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCC1Q92922 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCC1Q92922 KRT125P-201ENST00000546827 989 ntBASIC31.6■■■□□ 2.65
SMARCC1Q92922 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCC1Q92922 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCC1Q92922 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCC1Q92922 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.58■■■□□ 2.65
SMARCC1Q92922 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
SMARCC1Q92922 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCC1Q92922 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
SMARCC1Q92922 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
SMARCC1Q92922 AC022616.5-201ENST00000518796 181 ntBASIC31.57■■■□□ 2.64
SMARCC1Q92922 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.57■■■□□ 2.64
SMARCC1Q92922 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCC1Q92922 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCC1Q92922 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
SMARCC1Q92922 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.56■■■□□ 2.64
SMARCC1Q92922 KRT18P10-201ENST00000388836 1287 ntBASIC31.55■■■□□ 2.64
SMARCC1Q92922 BX664725.1-201ENST00000438252 379 ntBASIC31.55■■■□□ 2.64
SMARCC1Q92922 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.55■■■□□ 2.64
SMARCC1Q92922 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCC1Q92922 MIR4787-201ENST00000607364 84 ntBASIC31.55■■■□□ 2.64
SMARCC1Q92922 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
SMARCC1Q92922 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.54■■■□□ 2.64
SMARCC1Q92922 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.54■■■□□ 2.64
SMARCC1Q92922 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCC1Q92922 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCC1Q92922 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.53■■■□□ 2.64
SMARCC1Q92922 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.53■■■□□ 2.64
SMARCC1Q92922 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCC1Q92922 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCC1Q92922 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCC1Q92922 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.52■■■□□ 2.64
SMARCC1Q92922 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
SMARCC1Q92922 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCC1Q92922 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
SMARCC1Q92922 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCC1Q92922 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms