Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 WHAMMP2-203ENST00000563942 1603 ntBASIC21.26■□□□□ 0.99
RAB40AQ8WXH6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB40AQ8WXH6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB40AQ8WXH6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RAB40AQ8WXH6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.26■□□□□ 0.99
RAB40AQ8WXH6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB40AQ8WXH6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB40AQ8WXH6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB40AQ8WXH6 ERN1-208ENST00000606895 2068 ntBASIC21.25■□□□□ 0.99
RAB40AQ8WXH6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB40AQ8WXH6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB40AQ8WXH6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB40AQ8WXH6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RAB40AQ8WXH6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB40AQ8WXH6 AC142472.1-201ENST00000612013 1741 ntBASIC21.24■□□□□ 0.99
RAB40AQ8WXH6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB40AQ8WXH6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB40AQ8WXH6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB40AQ8WXH6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB40AQ8WXH6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB40AQ8WXH6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40AQ8WXH6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB40AQ8WXH6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40AQ8WXH6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RAB40AQ8WXH6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
RAB40AQ8WXH6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.2■□□□□ 0.99
RAB40AQ8WXH6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40AQ8WXH6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40AQ8WXH6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.2■□□□□ 0.98
RAB40AQ8WXH6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40AQ8WXH6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40AQ8WXH6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40AQ8WXH6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB40AQ8WXH6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40AQ8WXH6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40AQ8WXH6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40AQ8WXH6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RAB40AQ8WXH6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 AC142381.3-201ENST00000568208 1670 ntBASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40AQ8WXH6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40AQ8WXH6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40AQ8WXH6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40AQ8WXH6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40AQ8WXH6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RAB40AQ8WXH6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40AQ8WXH6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40AQ8WXH6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAB40AQ8WXH6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40AQ8WXH6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RAB40AQ8WXH6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB40AQ8WXH6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB40AQ8WXH6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB40AQ8WXH6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB40AQ8WXH6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB40AQ8WXH6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB40AQ8WXH6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB40AQ8WXH6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB40AQ8WXH6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40AQ8WXH6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40AQ8WXH6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAB40AQ8WXH6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40AQ8WXH6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40AQ8WXH6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40AQ8WXH6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 AC010501.1-201ENST00000606270 1962 ntBASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40AQ8WXH6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
RAB40AQ8WXH6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAB40AQ8WXH6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB40AQ8WXH6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RAB40AQ8WXH6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40AQ8WXH6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms