Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX33Q8WV41 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX33Q8WV41 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX33Q8WV41 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX33Q8WV41 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX33Q8WV41 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX33Q8WV41 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SNX33Q8WV41 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX33Q8WV41 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX33Q8WV41 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX33Q8WV41 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX33Q8WV41 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX33Q8WV41 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX33Q8WV41 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX33Q8WV41 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX33Q8WV41 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX33Q8WV41 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SNX33Q8WV41 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.76■■□□□ 1.07
SNX33Q8WV41 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX33Q8WV41 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX33Q8WV41 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX33Q8WV41 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX33Q8WV41 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX33Q8WV41 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX33Q8WV41 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX33Q8WV41 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX33Q8WV41 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX33Q8WV41 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SNX33Q8WV41 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.74■■□□□ 1.07
SNX33Q8WV41 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX33Q8WV41 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.74■■□□□ 1.07
SNX33Q8WV41 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX33Q8WV41 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX33Q8WV41 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 AC008813.1-201ENST00000536597 885 ntBASIC21.73■■□□□ 1.07
SNX33Q8WV41 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX33Q8WV41 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX33Q8WV41 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
SNX33Q8WV41 MIR4449-201ENST00000578365 66 ntBASIC21.72■■□□□ 1.07
SNX33Q8WV41 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX33Q8WV41 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.72■■□□□ 1.07
SNX33Q8WV41 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX33Q8WV41 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SNX33Q8WV41 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX33Q8WV41 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX33Q8WV41 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX33Q8WV41 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX33Q8WV41 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SNX33Q8WV41 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.7■■□□□ 1.06
SNX33Q8WV41 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
SNX33Q8WV41 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX33Q8WV41 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX33Q8WV41 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX33Q8WV41 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX33Q8WV41 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX33Q8WV41 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SNX33Q8WV41 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SNX33Q8WV41 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX33Q8WV41 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
SNX33Q8WV41 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
SNX33Q8WV41 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
SNX33Q8WV41 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX33Q8WV41 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.67■■□□□ 1.06
SNX33Q8WV41 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SNX33Q8WV41 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX33Q8WV41 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX33Q8WV41 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX33Q8WV41 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX33Q8WV41 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNX33Q8WV41 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNX33Q8WV41 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX33Q8WV41 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX33Q8WV41 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX33Q8WV41 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX33Q8WV41 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX33Q8WV41 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNX33Q8WV41 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNX33Q8WV41 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX33Q8WV41 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX33Q8WV41 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.64■■□□□ 1.06
SNX33Q8WV41 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SNX33Q8WV41 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX33Q8WV41 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SNX33Q8WV41 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
SNX33Q8WV41 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms