Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.23■■□□□ 1.47
PHC3Q8NDX5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PHC3Q8NDX5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.22■■□□□ 1.47
PHC3Q8NDX5 WHAMMP3-201ENST00000611636 1609 ntBASIC24.22■■□□□ 1.47
PHC3Q8NDX5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PHC3Q8NDX5 AC126177.7-201ENST00000547904 679 ntBASIC24.22■■□□□ 1.47
PHC3Q8NDX5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PHC3Q8NDX5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PHC3Q8NDX5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.22■■□□□ 1.47
PHC3Q8NDX5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PHC3Q8NDX5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.21■■□□□ 1.47
PHC3Q8NDX5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PHC3Q8NDX5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PHC3Q8NDX5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PHC3Q8NDX5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
PHC3Q8NDX5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PHC3Q8NDX5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.2■■□□□ 1.46
PHC3Q8NDX5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.2■■□□□ 1.46
PHC3Q8NDX5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.2■■□□□ 1.46
PHC3Q8NDX5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PHC3Q8NDX5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PHC3Q8NDX5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PHC3Q8NDX5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PHC3Q8NDX5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PHC3Q8NDX5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
PHC3Q8NDX5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PHC3Q8NDX5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PHC3Q8NDX5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PHC3Q8NDX5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.17■■□□□ 1.46
PHC3Q8NDX5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.16■■□□□ 1.46
PHC3Q8NDX5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PHC3Q8NDX5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PHC3Q8NDX5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PHC3Q8NDX5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PHC3Q8NDX5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.15■■□□□ 1.46
PHC3Q8NDX5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PHC3Q8NDX5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PHC3Q8NDX5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PHC3Q8NDX5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PHC3Q8NDX5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
PHC3Q8NDX5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.14■■□□□ 1.45
PHC3Q8NDX5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
PHC3Q8NDX5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PHC3Q8NDX5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PHC3Q8NDX5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.13■■□□□ 1.45
PHC3Q8NDX5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PHC3Q8NDX5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.13■■□□□ 1.45
PHC3Q8NDX5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.13■■□□□ 1.45
PHC3Q8NDX5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PHC3Q8NDX5 AC092296.2-201ENST00000589470 999 ntBASIC24.12■■□□□ 1.45
PHC3Q8NDX5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PHC3Q8NDX5 RNF126P1-201ENST00000567452 1320 ntBASIC24.11■■□□□ 1.45
PHC3Q8NDX5 AC020928.2-201ENST00000588717 2197 ntBASIC24.11■■□□□ 1.45
PHC3Q8NDX5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PHC3Q8NDX5 AL157400.5-201ENST00000507624 621 ntBASIC24.11■■□□□ 1.45
PHC3Q8NDX5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PHC3Q8NDX5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PHC3Q8NDX5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
PHC3Q8NDX5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PHC3Q8NDX5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.1■■□□□ 1.45
PHC3Q8NDX5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PHC3Q8NDX5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PHC3Q8NDX5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PHC3Q8NDX5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.09■■□□□ 1.45
PHC3Q8NDX5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PHC3Q8NDX5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PHC3Q8NDX5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.08■■□□□ 1.45
PHC3Q8NDX5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PHC3Q8NDX5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PHC3Q8NDX5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PHC3Q8NDX5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PHC3Q8NDX5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PHC3Q8NDX5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.07■■□□□ 1.44
PHC3Q8NDX5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PHC3Q8NDX5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PHC3Q8NDX5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PHC3Q8NDX5 ECEL1P2-201ENST00000461596 1295 ntBASIC24.06■■□□□ 1.44
PHC3Q8NDX5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.06■■□□□ 1.44
PHC3Q8NDX5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PHC3Q8NDX5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PHC3Q8NDX5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PHC3Q8NDX5 RARRES2P2-201ENST00000394842 485 ntBASIC24.05■■□□□ 1.44
PHC3Q8NDX5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.05■■□□□ 1.44
PHC3Q8NDX5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.05■■□□□ 1.44
PHC3Q8NDX5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PHC3Q8NDX5 AL359504.2-201ENST00000605506 1601 ntBASIC24.05■■□□□ 1.44
PHC3Q8NDX5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.05■■□□□ 1.44
PHC3Q8NDX5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
PHC3Q8NDX5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PHC3Q8NDX5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.04■■□□□ 1.44
PHC3Q8NDX5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.04■■□□□ 1.44
PHC3Q8NDX5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PHC3Q8NDX5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms