Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD1Q8N668 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
COMMD1Q8N668 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD1Q8N668 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COMMD1Q8N668 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COMMD1Q8N668 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD1Q8N668 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.98■□□□□ 0.79
COMMD1Q8N668 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.98■□□□□ 0.79
COMMD1Q8N668 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD1Q8N668 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD1Q8N668 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
COMMD1Q8N668 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD1Q8N668 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD1Q8N668 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD1Q8N668 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD1Q8N668 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD1Q8N668 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
COMMD1Q8N668 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD1Q8N668 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.96■□□□□ 0.79
COMMD1Q8N668 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.96■□□□□ 0.79
COMMD1Q8N668 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COMMD1Q8N668 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD1Q8N668 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD1Q8N668 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COMMD1Q8N668 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.96■□□□□ 0.79
COMMD1Q8N668 LINC00543-201ENST00000567234 1845 ntBASIC19.96■□□□□ 0.79
COMMD1Q8N668 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD1Q8N668 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD1Q8N668 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.96■□□□□ 0.79
COMMD1Q8N668 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD1Q8N668 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD1Q8N668 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD1Q8N668 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
COMMD1Q8N668 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD1Q8N668 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD1Q8N668 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COMMD1Q8N668 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COMMD1Q8N668 AC110285.7-201ENST00000624417 1536 ntBASIC19.94■□□□□ 0.78
COMMD1Q8N668 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.94■□□□□ 0.78
COMMD1Q8N668 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD1Q8N668 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD1Q8N668 AC092803.2-201ENST00000564287 1899 ntBASIC19.94■□□□□ 0.78
COMMD1Q8N668 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COMMD1Q8N668 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COMMD1Q8N668 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD1Q8N668 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.93■□□□□ 0.78
COMMD1Q8N668 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.93■□□□□ 0.78
COMMD1Q8N668 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD1Q8N668 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD1Q8N668 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD1Q8N668 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD1Q8N668 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD1Q8N668 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.91■□□□□ 0.78
COMMD1Q8N668 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD1Q8N668 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD1Q8N668 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD1Q8N668 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD1Q8N668 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD1Q8N668 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.9■□□□□ 0.78
COMMD1Q8N668 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COMMD1Q8N668 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD1Q8N668 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD1Q8N668 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD1Q8N668 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.89■□□□□ 0.77
COMMD1Q8N668 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD1Q8N668 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD1Q8N668 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 ERN1-208ENST00000606895 2068 ntBASIC19.88■□□□□ 0.77
COMMD1Q8N668 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COMMD1Q8N668 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COMMD1Q8N668 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD1Q8N668 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COMMD1Q8N668 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
COMMD1Q8N668 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.88■□□□□ 0.77
COMMD1Q8N668 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.88■□□□□ 0.77
COMMD1Q8N668 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD1Q8N668 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD1Q8N668 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms