Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPH1Q70E73 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPH1Q70E73 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAPH1Q70E73 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RAPH1Q70E73 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.3■■□□□ 1.48
RAPH1Q70E73 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
RAPH1Q70E73 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.3■■□□□ 1.48
RAPH1Q70E73 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RAPH1Q70E73 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPH1Q70E73 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RAPH1Q70E73 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RAPH1Q70E73 MIR219A2-201ENST00000608502 1504 ntBASIC24.29■■□□□ 1.48
RAPH1Q70E73 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
RAPH1Q70E73 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RAPH1Q70E73 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RAPH1Q70E73 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.28■■□□□ 1.48
RAPH1Q70E73 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RAPH1Q70E73 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RAPH1Q70E73 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RAPH1Q70E73 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
RAPH1Q70E73 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RAPH1Q70E73 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RAPH1Q70E73 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.27■■□□□ 1.48
RAPH1Q70E73 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RAPH1Q70E73 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RAPH1Q70E73 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RAPH1Q70E73 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.26■■□□□ 1.47
RAPH1Q70E73 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
RAPH1Q70E73 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RAPH1Q70E73 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RAPH1Q70E73 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RAPH1Q70E73 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.25■■□□□ 1.47
RAPH1Q70E73 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
RAPH1Q70E73 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RAPH1Q70E73 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
RAPH1Q70E73 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RAPH1Q70E73 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.24■■□□□ 1.47
RAPH1Q70E73 ZNRF2P2-203ENST00000454624 420 ntBASIC24.24■■□□□ 1.47
RAPH1Q70E73 AC148477.6-201ENST00000623746 465 ntBASIC24.24■■□□□ 1.47
RAPH1Q70E73 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.24■■□□□ 1.47
RAPH1Q70E73 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RAPH1Q70E73 ERN1-208ENST00000606895 2068 ntBASIC24.23■■□□□ 1.47
RAPH1Q70E73 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPH1Q70E73 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPH1Q70E73 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPH1Q70E73 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RAPH1Q70E73 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.22■■□□□ 1.47
RAPH1Q70E73 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.22■■□□□ 1.47
RAPH1Q70E73 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RAPH1Q70E73 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPH1Q70E73 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.22■■□□□ 1.47
RAPH1Q70E73 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
RAPH1Q70E73 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAPH1Q70E73 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.21■■□□□ 1.47
RAPH1Q70E73 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPH1Q70E73 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RAPH1Q70E73 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.21■■□□□ 1.47
RAPH1Q70E73 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPH1Q70E73 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.21■■□□□ 1.47
RAPH1Q70E73 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPH1Q70E73 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
RAPH1Q70E73 AC010501.1-201ENST00000606270 1962 ntBASIC24.21■■□□□ 1.47
RAPH1Q70E73 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPH1Q70E73 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
RAPH1Q70E73 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPH1Q70E73 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPH1Q70E73 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAPH1Q70E73 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RAPH1Q70E73 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.19■■□□□ 1.46
RAPH1Q70E73 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAPH1Q70E73 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
RAPH1Q70E73 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPH1Q70E73 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPH1Q70E73 AL359258.2-201ENST00000564063 1566 ntBASIC24.18■■□□□ 1.46
RAPH1Q70E73 HLA-V-202ENST00000446817 847 ntBASIC24.18■■□□□ 1.46
RAPH1Q70E73 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.18■■□□□ 1.46
RAPH1Q70E73 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPH1Q70E73 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPH1Q70E73 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPH1Q70E73 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
RAPH1Q70E73 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RAPH1Q70E73 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPH1Q70E73 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RAPH1Q70E73 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.17■■□□□ 1.46
RAPH1Q70E73 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.17■■□□□ 1.46
RAPH1Q70E73 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPH1Q70E73 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RAPH1Q70E73 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPH1Q70E73 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPH1Q70E73 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAPH1Q70E73 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.16■■□□□ 1.46
RAPH1Q70E73 AC093323.1-202ENST00000635031 2045 ntBASIC24.16■■□□□ 1.46
RAPH1Q70E73 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPH1Q70E73 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPH1Q70E73 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPH1Q70E73 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPH1Q70E73 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.16■■□□□ 1.46
RAPH1Q70E73 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPH1Q70E73 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.15■■□□□ 1.46
RAPH1Q70E73 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms