Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TMEM88Q6PEY1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88Q6PEY1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88Q6PEY1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM88Q6PEY1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM88Q6PEY1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
TMEM88Q6PEY1 AC142381.3-201ENST00000568208 1670 ntBASIC19.43■□□□□ 0.7
TMEM88Q6PEY1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88Q6PEY1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88Q6PEY1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88Q6PEY1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM88Q6PEY1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM88Q6PEY1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM88Q6PEY1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM88Q6PEY1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88Q6PEY1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88Q6PEY1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TMEM88Q6PEY1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88Q6PEY1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88Q6PEY1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM88Q6PEY1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM88Q6PEY1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM88Q6PEY1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 AL133380.1-201ENST00000506013 324 ntBASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88Q6PEY1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88Q6PEY1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM88Q6PEY1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88Q6PEY1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88Q6PEY1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88Q6PEY1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88Q6PEY1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88Q6PEY1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TMEM88Q6PEY1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88Q6PEY1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TMEM88Q6PEY1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88Q6PEY1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88Q6PEY1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM88Q6PEY1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88Q6PEY1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88Q6PEY1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88Q6PEY1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88Q6PEY1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM88Q6PEY1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TMEM88Q6PEY1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88Q6PEY1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TMEM88Q6PEY1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88Q6PEY1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM88Q6PEY1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.34■□□□□ 0.69
TMEM88Q6PEY1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
TMEM88Q6PEY1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM88Q6PEY1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88Q6PEY1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88Q6PEY1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms