Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PRPF40BQ6NWY9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.77■■■□□ 2.52
PRPF40BQ6NWY9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.76■■■□□ 2.52
PRPF40BQ6NWY9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.76■■■□□ 2.52
PRPF40BQ6NWY9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PRPF40BQ6NWY9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.76■■■□□ 2.51
PRPF40BQ6NWY9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.76■■■□□ 2.51
PRPF40BQ6NWY9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PRPF40BQ6NWY9 AC103724.3-201ENST00000564481 992 ntBASIC30.76■■■□□ 2.51
PRPF40BQ6NWY9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PRPF40BQ6NWY9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRPF40BQ6NWY9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRPF40BQ6NWY9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRPF40BQ6NWY9 AC142086.6-201ENST00000621154 1765 ntBASIC30.75■■■□□ 2.51
PRPF40BQ6NWY9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.75■■■□□ 2.51
PRPF40BQ6NWY9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRPF40BQ6NWY9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.75■■■□□ 2.51
PRPF40BQ6NWY9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.74■■■□□ 2.51
PRPF40BQ6NWY9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.74■■■□□ 2.51
PRPF40BQ6NWY9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.74■■■□□ 2.51
PRPF40BQ6NWY9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.74■■■□□ 2.51
PRPF40BQ6NWY9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PRPF40BQ6NWY9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
PRPF40BQ6NWY9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PRPF40BQ6NWY9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PRPF40BQ6NWY9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PRPF40BQ6NWY9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PRPF40BQ6NWY9 AL031848.2-201ENST00000607670 837 ntBASIC30.72■■■□□ 2.51
PRPF40BQ6NWY9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PRPF40BQ6NWY9 AL356441.2-201ENST00000443009 864 ntBASIC30.71■■■□□ 2.51
PRPF40BQ6NWY9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.71■■■□□ 2.51
PRPF40BQ6NWY9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
PRPF40BQ6NWY9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PRPF40BQ6NWY9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PRPF40BQ6NWY9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
PRPF40BQ6NWY9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.7■■■□□ 2.51
PRPF40BQ6NWY9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PRPF40BQ6NWY9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.69■■■□□ 2.5
PRPF40BQ6NWY9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.69■■■□□ 2.5
PRPF40BQ6NWY9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
PRPF40BQ6NWY9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
PRPF40BQ6NWY9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PRPF40BQ6NWY9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PRPF40BQ6NWY9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PRPF40BQ6NWY9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PRPF40BQ6NWY9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.68■■■□□ 2.5
PRPF40BQ6NWY9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PRPF40BQ6NWY9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
PRPF40BQ6NWY9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
PRPF40BQ6NWY9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PRPF40BQ6NWY9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.64■■■□□ 2.5
PRPF40BQ6NWY9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.64■■■□□ 2.5
PRPF40BQ6NWY9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
PRPF40BQ6NWY9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.63■■■□□ 2.49
PRPF40BQ6NWY9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
PRPF40BQ6NWY9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PRPF40BQ6NWY9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
PRPF40BQ6NWY9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
PRPF40BQ6NWY9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PRPF40BQ6NWY9 AL359504.2-201ENST00000605506 1601 ntBASIC30.62■■■□□ 2.49
PRPF40BQ6NWY9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PRPF40BQ6NWY9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PRPF40BQ6NWY9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.6■■■□□ 2.49
PRPF40BQ6NWY9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
PRPF40BQ6NWY9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PRPF40BQ6NWY9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.6■■■□□ 2.49
PRPF40BQ6NWY9 AP002414.2-202ENST00000590929 1450 ntBASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PRPF40BQ6NWY9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
PRPF40BQ6NWY9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
PRPF40BQ6NWY9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PRPF40BQ6NWY9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PRPF40BQ6NWY9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PRPF40BQ6NWY9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.58■■■□□ 2.49
PRPF40BQ6NWY9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.58■■■□□ 2.49
PRPF40BQ6NWY9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.57■■■□□ 2.48
PRPF40BQ6NWY9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PRPF40BQ6NWY9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PRPF40BQ6NWY9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms