Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.66■■□□□ 1.22
HLA-DQA1Q5Y7H0 RP9P-202ENST00000450133 1212 ntBASIC22.65■■□□□ 1.22
HLA-DQA1Q5Y7H0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HLA-DQA1Q5Y7H0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HLA-DQA1Q5Y7H0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.64■■□□□ 1.22
HLA-DQA1Q5Y7H0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
HLA-DQA1Q5Y7H0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HLA-DQA1Q5Y7H0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.64■■□□□ 1.21
HLA-DQA1Q5Y7H0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.64■■□□□ 1.21
HLA-DQA1Q5Y7H0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.63■■□□□ 1.21
HLA-DQA1Q5Y7H0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.63■■□□□ 1.21
HLA-DQA1Q5Y7H0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DQA1Q5Y7H0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DQA1Q5Y7H0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
HLA-DQA1Q5Y7H0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DQA1Q5Y7H0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA1Q5Y7H0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DQA1Q5Y7H0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HLA-DQA1Q5Y7H0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DQA1Q5Y7H0 AC093536.1-201ENST00000569153 554 ntBASIC22.61■■□□□ 1.21
HLA-DQA1Q5Y7H0 ABHD17AP5-201ENST00000580133 923 ntBASIC22.61■■□□□ 1.21
HLA-DQA1Q5Y7H0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.61■■□□□ 1.21
HLA-DQA1Q5Y7H0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.61■■□□□ 1.21
HLA-DQA1Q5Y7H0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.6■■□□□ 1.21
HLA-DQA1Q5Y7H0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.6■■□□□ 1.21
HLA-DQA1Q5Y7H0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DQA1Q5Y7H0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.6■■□□□ 1.21
HLA-DQA1Q5Y7H0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
HLA-DQA1Q5Y7H0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
HLA-DQA1Q5Y7H0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.59■■□□□ 1.21
HLA-DQA1Q5Y7H0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.59■■□□□ 1.21
HLA-DQA1Q5Y7H0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
HLA-DQA1Q5Y7H0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HLA-DQA1Q5Y7H0 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.59■■□□□ 1.21
HLA-DQA1Q5Y7H0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.59■■□□□ 1.21
HLA-DQA1Q5Y7H0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
HLA-DQA1Q5Y7H0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
HLA-DQA1Q5Y7H0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
HLA-DQA1Q5Y7H0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
HLA-DQA1Q5Y7H0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
HLA-DQA1Q5Y7H0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
HLA-DQA1Q5Y7H0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
HLA-DQA1Q5Y7H0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQA1Q5Y7H0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
HLA-DQA1Q5Y7H0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQA1Q5Y7H0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
HLA-DQA1Q5Y7H0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
HLA-DQA1Q5Y7H0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQA1Q5Y7H0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
HLA-DQA1Q5Y7H0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQA1Q5Y7H0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
HLA-DQA1Q5Y7H0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 AC133552.2-201ENST00000619106 1032 ntBASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQA1Q5Y7H0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
HLA-DQA1Q5Y7H0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQA1Q5Y7H0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA1Q5Y7H0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA1Q5Y7H0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA1Q5Y7H0 AC026202.3-201ENST00000600805 1127 ntBASIC22.52■■□□□ 1.2
HLA-DQA1Q5Y7H0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA1Q5Y7H0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA1Q5Y7H0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA1Q5Y7H0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms