Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP2P63027 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAMP2P63027 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VAMP2P63027 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VAMP2P63027 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VAMP2P63027 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.83■□□□□ 0.76
VAMP2P63027 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VAMP2P63027 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VAMP2P63027 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
VAMP2P63027 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP2P63027 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP2P63027 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP2P63027 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.82■□□□□ 0.76
VAMP2P63027 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.82■□□□□ 0.76
VAMP2P63027 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAMP2P63027 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VAMP2P63027 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.82■□□□□ 0.76
VAMP2P63027 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VAMP2P63027 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.81■□□□□ 0.76
VAMP2P63027 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.81■□□□□ 0.76
VAMP2P63027 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAMP2P63027 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.8■□□□□ 0.76
VAMP2P63027 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.8■□□□□ 0.76
VAMP2P63027 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VAMP2P63027 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
VAMP2P63027 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAMP2P63027 LINC00273-201ENST00000539813 1452 ntBASIC19.79■□□□□ 0.76
VAMP2P63027 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAMP2P63027 AC010501.1-201ENST00000606270 1962 ntBASIC19.79■□□□□ 0.76
VAMP2P63027 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAMP2P63027 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
VAMP2P63027 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
VAMP2P63027 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VAMP2P63027 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAMP2P63027 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VAMP2P63027 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.78■□□□□ 0.76
VAMP2P63027 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAMP2P63027 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAMP2P63027 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAMP2P63027 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAMP2P63027 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAMP2P63027 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAMP2P63027 CAHM-201ENST00000604200 896 ntBASIC19.77■□□□□ 0.76
VAMP2P63027 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAMP2P63027 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.76■□□□□ 0.75
VAMP2P63027 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAMP2P63027 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAMP2P63027 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAMP2P63027 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAMP2P63027 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAMP2P63027 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAMP2P63027 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAMP2P63027 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAMP2P63027 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAMP2P63027 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAMP2P63027 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAMP2P63027 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
VAMP2P63027 WHAMMP3-201ENST00000611636 1609 ntBASIC19.75■□□□□ 0.75
VAMP2P63027 PKD1P6-201ENST00000343738 4769 ntBASIC19.75■□□□□ 0.75
VAMP2P63027 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VAMP2P63027 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VAMP2P63027 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.74■□□□□ 0.75
VAMP2P63027 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAMP2P63027 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAMP2P63027 MIR762-201ENST00000390236 83 ntBASIC19.74■□□□□ 0.75
VAMP2P63027 AC108673.1-201ENST00000510422 1159 ntBASIC19.74■□□□□ 0.75
VAMP2P63027 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAMP2P63027 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VAMP2P63027 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAMP2P63027 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAMP2P63027 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAMP2P63027 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAMP2P63027 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAMP2P63027 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VAMP2P63027 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.73■□□□□ 0.75
VAMP2P63027 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VAMP2P63027 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAMP2P63027 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAMP2P63027 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.72■□□□□ 0.75
VAMP2P63027 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAMP2P63027 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAMP2P63027 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAMP2P63027 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms