Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA52P62987 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBA52P62987 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA52P62987 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
UBA52P62987 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
UBA52P62987 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA52P62987 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBA52P62987 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBA52P62987 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBA52P62987 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.72■□□□□ 0.91
UBA52P62987 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.72■□□□□ 0.91
UBA52P62987 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBA52P62987 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBA52P62987 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBA52P62987 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBA52P62987 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
UBA52P62987 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
UBA52P62987 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBA52P62987 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBA52P62987 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBA52P62987 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
UBA52P62987 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBA52P62987 AC022413.1-201ENST00000624602 984 ntBASIC20.7■□□□□ 0.9
UBA52P62987 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBA52P62987 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBA52P62987 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBA52P62987 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBA52P62987 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.69■□□□□ 0.9
UBA52P62987 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.69■□□□□ 0.9
UBA52P62987 AC008813.1-201ENST00000536597 885 ntBASIC20.68■□□□□ 0.9
UBA52P62987 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
UBA52P62987 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBA52P62987 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBA52P62987 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBA52P62987 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.67■□□□□ 0.9
UBA52P62987 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBA52P62987 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBA52P62987 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBA52P62987 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.67■□□□□ 0.9
UBA52P62987 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBA52P62987 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBA52P62987 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBA52P62987 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBA52P62987 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBA52P62987 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.66■□□□□ 0.9
UBA52P62987 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBA52P62987 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBA52P62987 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBA52P62987 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
UBA52P62987 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBA52P62987 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.65■□□□□ 0.9
UBA52P62987 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
UBA52P62987 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBA52P62987 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBA52P62987 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBA52P62987 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBA52P62987 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBA52P62987 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.65■□□□□ 0.9
UBA52P62987 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.64■□□□□ 0.89
UBA52P62987 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBA52P62987 NTF6A-201ENST00000591175 560 ntBASIC20.64■□□□□ 0.89
UBA52P62987 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBA52P62987 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBA52P62987 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBA52P62987 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA52P62987 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA52P62987 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBA52P62987 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBA52P62987 DUSP8P4-201ENST00000399538 1761 ntBASIC20.63■□□□□ 0.89
UBA52P62987 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBA52P62987 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.62■□□□□ 0.89
UBA52P62987 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.62■□□□□ 0.89
UBA52P62987 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA52P62987 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UBA52P62987 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBA52P62987 AP004833.2-201ENST00000532228 1454 ntBASIC20.62■□□□□ 0.89
UBA52P62987 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
UBA52P62987 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBA52P62987 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA52P62987 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA52P62987 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA52P62987 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.6■□□□□ 0.89
UBA52P62987 AC012354.3-201ENST00000623734 483 ntBASIC20.6■□□□□ 0.89
UBA52P62987 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA52P62987 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.6■□□□□ 0.89
UBA52P62987 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA52P62987 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBA52P62987 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA52P62987 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA52P62987 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA52P62987 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.59■□□□□ 0.89
UBA52P62987 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms