Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LSM6P62312 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.43■■□□□ 1.02
LSM6P62312 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LSM6P62312 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LSM6P62312 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LSM6P62312 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LSM6P62312 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LSM6P62312 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.42■■□□□ 1.02
LSM6P62312 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.42■■□□□ 1.02
LSM6P62312 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LSM6P62312 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
LSM6P62312 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LSM6P62312 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LSM6P62312 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LSM6P62312 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.4■■□□□ 1.02
LSM6P62312 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
LSM6P62312 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.4■■□□□ 1.02
LSM6P62312 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.4■■□□□ 1.02
LSM6P62312 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.4■■□□□ 1.02
LSM6P62312 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LSM6P62312 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LSM6P62312 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LSM6P62312 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LSM6P62312 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LSM6P62312 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.39■■□□□ 1.02
LSM6P62312 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LSM6P62312 AC060814.1-201ENST00000554326 538 ntBASIC21.39■■□□□ 1.01
LSM6P62312 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LSM6P62312 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LSM6P62312 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LSM6P62312 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LSM6P62312 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LSM6P62312 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.38■■□□□ 1.01
LSM6P62312 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LSM6P62312 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LSM6P62312 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
LSM6P62312 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.37■■□□□ 1.01
LSM6P62312 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LSM6P62312 AC010501.1-201ENST00000606270 1962 ntBASIC21.36■■□□□ 1.01
LSM6P62312 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSM6P62312 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LSM6P62312 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.36■■□□□ 1.01
LSM6P62312 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSM6P62312 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LSM6P62312 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LSM6P62312 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LSM6P62312 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSM6P62312 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.36■■□□□ 1.01
LSM6P62312 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.35■■□□□ 1.01
LSM6P62312 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LSM6P62312 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LSM6P62312 AL157400.5-201ENST00000507624 621 ntBASIC21.35■■□□□ 1.01
LSM6P62312 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 MIR4449-201ENST00000578365 66 ntBASIC21.34■■□□□ 1.01
LSM6P62312 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSM6P62312 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
LSM6P62312 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.33■■□□□ 1.01
LSM6P62312 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.33■■□□□ 1.01
LSM6P62312 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LSM6P62312 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.32■■□□□ 1
LSM6P62312 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.32■■□□□ 1
LSM6P62312 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.32■■□□□ 1
LSM6P62312 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.32■■□□□ 1
LSM6P62312 AC025884.2-201ENST00000553429 711 ntBASIC21.32■■□□□ 1
LSM6P62312 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.32■■□□□ 1
LSM6P62312 AC092296.2-201ENST00000589470 999 ntBASIC21.32■■□□□ 1
LSM6P62312 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LSM6P62312 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.32■■□□□ 1
LSM6P62312 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.31■■□□□ 1
LSM6P62312 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LSM6P62312 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LSM6P62312 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.31■■□□□ 1
LSM6P62312 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LSM6P62312 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.31■■□□□ 1
LSM6P62312 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.31■■□□□ 1
LSM6P62312 ERN1-208ENST00000606895 2068 ntBASIC21.31■■□□□ 1
LSM6P62312 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.31■■□□□ 1
LSM6P62312 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.31■■□□□ 1
LSM6P62312 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LSM6P62312 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
LSM6P62312 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LSM6P62312 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LSM6P62312 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LSM6P62312 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LSM6P62312 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.29■■□□□ 1
LSM6P62312 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LSM6P62312 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.29■■□□□ 1
LSM6P62312 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.29■■□□□ 1
LSM6P62312 AC022413.1-201ENST00000624602 984 ntBASIC21.29■■□□□ 1
LSM6P62312 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.29■■□□□ 1
LSM6P62312 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LSM6P62312 ECEL1P2-201ENST00000461596 1295 ntBASIC21.28■■□□□ 1
LSM6P62312 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms