Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACTBP60709 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ACTBP60709 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTBP60709 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ACTBP60709 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTBP60709 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTBP60709 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.77■□□□□ 0.92
ACTBP60709 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTBP60709 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTBP60709 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.77■□□□□ 0.91
ACTBP60709 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.77■□□□□ 0.91
ACTBP60709 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTBP60709 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTBP60709 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.76■□□□□ 0.91
ACTBP60709 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.76■□□□□ 0.91
ACTBP60709 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.76■□□□□ 0.91
ACTBP60709 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.76■□□□□ 0.91
ACTBP60709 WHAMMP3-201ENST00000611636 1609 ntBASIC20.75■□□□□ 0.91
ACTBP60709 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTBP60709 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTBP60709 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ACTBP60709 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTBP60709 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ACTBP60709 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACTBP60709 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTBP60709 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTBP60709 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.73■□□□□ 0.91
ACTBP60709 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACTBP60709 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.73■□□□□ 0.91
ACTBP60709 AL139125.2-201ENST00000623134 1869 ntBASIC20.73■□□□□ 0.91
ACTBP60709 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTBP60709 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTBP60709 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTBP60709 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTBP60709 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ACTBP60709 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ACTBP60709 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTBP60709 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.72■□□□□ 0.91
ACTBP60709 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACTBP60709 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACTBP60709 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTBP60709 AC022211.4-201ENST00000625094 2161 ntBASIC20.71■□□□□ 0.91
ACTBP60709 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTBP60709 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTBP60709 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTBP60709 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTBP60709 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTBP60709 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTBP60709 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.7■□□□□ 0.9
ACTBP60709 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACTBP60709 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.7■□□□□ 0.9
ACTBP60709 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.7■□□□□ 0.9
ACTBP60709 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACTBP60709 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTBP60709 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTBP60709 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTBP60709 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ACTBP60709 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ACTBP60709 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTBP60709 AC138932.3-201ENST00000567634 1902 ntBASIC20.68■□□□□ 0.9
ACTBP60709 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.68■□□□□ 0.9
ACTBP60709 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTBP60709 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.68■□□□□ 0.9
ACTBP60709 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTBP60709 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTBP60709 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.67■□□□□ 0.9
ACTBP60709 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACTBP60709 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.67■□□□□ 0.9
ACTBP60709 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACTBP60709 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
ACTBP60709 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.66■□□□□ 0.9
ACTBP60709 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACTBP60709 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.66■□□□□ 0.9
ACTBP60709 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTBP60709 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTBP60709 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTBP60709 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTBP60709 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.65■□□□□ 0.9
ACTBP60709 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTBP60709 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ACTBP60709 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ACTBP60709 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTBP60709 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ACTBP60709 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ACTBP60709 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTBP60709 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTBP60709 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.64■□□□□ 0.89
ACTBP60709 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTBP60709 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTBP60709 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTBP60709 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTBP60709 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTBP60709 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms