Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGA2P52926 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HMGA2P52926 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGA2P52926 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGA2P52926 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGA2P52926 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.28■■□□□ 1.16
HMGA2P52926 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HMGA2P52926 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HMGA2P52926 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.28■■□□□ 1.16
HMGA2P52926 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.28■■□□□ 1.16
HMGA2P52926 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.27■■□□□ 1.16
HMGA2P52926 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.27■■□□□ 1.16
HMGA2P52926 AC096887.2-201ENST00000623443 1957 ntBASIC22.27■■□□□ 1.15
HMGA2P52926 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HMGA2P52926 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.26■■□□□ 1.15
HMGA2P52926 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGA2P52926 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGA2P52926 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGA2P52926 AC138932.3-201ENST00000567634 1902 ntBASIC22.25■■□□□ 1.15
HMGA2P52926 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.25■■□□□ 1.15
HMGA2P52926 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGA2P52926 AL139125.2-201ENST00000623134 1869 ntBASIC22.24■■□□□ 1.15
HMGA2P52926 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
HMGA2P52926 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HMGA2P52926 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.23■■□□□ 1.15
HMGA2P52926 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGA2P52926 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGA2P52926 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGA2P52926 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.23■■□□□ 1.15
HMGA2P52926 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
HMGA2P52926 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.23■■□□□ 1.15
HMGA2P52926 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGA2P52926 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.22■■□□□ 1.15
HMGA2P52926 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGA2P52926 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.22■■□□□ 1.15
HMGA2P52926 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
HMGA2P52926 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.22■■□□□ 1.15
HMGA2P52926 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.22■■□□□ 1.15
HMGA2P52926 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.22■■□□□ 1.15
HMGA2P52926 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.22■■□□□ 1.15
HMGA2P52926 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.22■■□□□ 1.15
HMGA2P52926 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HMGA2P52926 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGA2P52926 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGA2P52926 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HMGA2P52926 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.21■■□□□ 1.15
HMGA2P52926 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HMGA2P52926 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
HMGA2P52926 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HMGA2P52926 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGA2P52926 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGA2P52926 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.2■■□□□ 1.14
HMGA2P52926 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGA2P52926 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGA2P52926 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGA2P52926 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGA2P52926 AC008813.1-201ENST00000536597 885 ntBASIC22.19■■□□□ 1.14
HMGA2P52926 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.19■■□□□ 1.14
HMGA2P52926 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGA2P52926 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HMGA2P52926 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.19■■□□□ 1.14
HMGA2P52926 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HMGA2P52926 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGA2P52926 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGA2P52926 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGA2P52926 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
HMGA2P52926 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGA2P52926 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGA2P52926 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.18■■□□□ 1.14
HMGA2P52926 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
HMGA2P52926 AC148477.6-201ENST00000623746 465 ntBASIC22.18■■□□□ 1.14
HMGA2P52926 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGA2P52926 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGA2P52926 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGA2P52926 MIR219A2-201ENST00000608502 1504 ntBASIC22.16■■□□□ 1.14
HMGA2P52926 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
HMGA2P52926 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.16■■□□□ 1.14
HMGA2P52926 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.16■■□□□ 1.14
HMGA2P52926 LINC01971-201ENST00000617888 1048 ntBASIC22.16■■□□□ 1.14
HMGA2P52926 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
HMGA2P52926 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGA2P52926 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGA2P52926 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGA2P52926 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.16■■□□□ 1.14
HMGA2P52926 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGA2P52926 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HMGA2P52926 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGA2P52926 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGA2P52926 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HMGA2P52926 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.15■■□□□ 1.14
HMGA2P52926 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
HMGA2P52926 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGA2P52926 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HMGA2P52926 DUX4L13-201ENST00000554103 1267 ntBASIC22.14■■□□□ 1.13
HMGA2P52926 DUX4L15-201ENST00000611059 1267 ntBASIC22.14■■□□□ 1.13
HMGA2P52926 DUX4L23-201ENST00000615195 1269 ntBASIC22.14■■□□□ 1.13
HMGA2P52926 DUX4L24-201ENST00000617576 1269 ntBASIC22.14■■□□□ 1.13
HMGA2P52926 DUX4L22-201ENST00000618238 1269 ntBASIC22.14■■□□□ 1.13
HMGA2P52926 DUX4L20-201ENST00000619712 1269 ntBASIC22.14■■□□□ 1.13
HMGA2P52926 DUX4L21-201ENST00000622058 1269 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms