Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.22■■□□□ 1.31
POLR2JP52435 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.22■■□□□ 1.31
POLR2JP52435 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
POLR2JP52435 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2JP52435 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2JP52435 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2JP52435 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2JP52435 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
POLR2JP52435 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
POLR2JP52435 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2JP52435 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
POLR2JP52435 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
POLR2JP52435 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
POLR2JP52435 AC142381.3-201ENST00000568208 1670 ntBASIC23.2■■□□□ 1.3
POLR2JP52435 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR2JP52435 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR2JP52435 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR2JP52435 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR2JP52435 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR2JP52435 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.18■■□□□ 1.3
POLR2JP52435 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2JP52435 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.18■■□□□ 1.3
POLR2JP52435 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2JP52435 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2JP52435 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.18■■□□□ 1.3
POLR2JP52435 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
POLR2JP52435 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
POLR2JP52435 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
POLR2JP52435 LINC01971-201ENST00000617888 1048 ntBASIC23.17■■□□□ 1.3
POLR2JP52435 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
POLR2JP52435 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
POLR2JP52435 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
POLR2JP52435 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
POLR2JP52435 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.16■■□□□ 1.3
POLR2JP52435 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2JP52435 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.16■■□□□ 1.3
POLR2JP52435 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
POLR2JP52435 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2JP52435 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
POLR2JP52435 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2JP52435 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2JP52435 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2JP52435 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2JP52435 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.15■■□□□ 1.3
POLR2JP52435 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
POLR2JP52435 AC008813.1-201ENST00000536597 885 ntBASIC23.14■■□□□ 1.29
POLR2JP52435 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.14■■□□□ 1.29
POLR2JP52435 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
POLR2JP52435 AC022211.4-201ENST00000625094 2161 ntBASIC23.14■■□□□ 1.29
POLR2JP52435 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.14■■□□□ 1.29
POLR2JP52435 MIR219A2-201ENST00000608502 1504 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
POLR2JP52435 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
POLR2JP52435 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
POLR2JP52435 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
POLR2JP52435 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L13-201ENST00000554103 1267 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L15-201ENST00000611059 1267 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L23-201ENST00000615195 1269 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L24-201ENST00000617576 1269 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L22-201ENST00000618238 1269 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L20-201ENST00000619712 1269 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L21-201ENST00000622058 1269 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L10-201ENST00000622460 1267 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 DUX4L25-201ENST00000624915 1269 ntBASIC23.13■■□□□ 1.29
POLR2JP52435 AC096887.2-201ENST00000623443 1957 ntBASIC23.12■■□□□ 1.29
POLR2JP52435 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.12■■□□□ 1.29
POLR2JP52435 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
POLR2JP52435 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
POLR2JP52435 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.12■■□□□ 1.29
POLR2JP52435 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
POLR2JP52435 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
POLR2JP52435 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.11■■□□□ 1.29
POLR2JP52435 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
POLR2JP52435 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
POLR2JP52435 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.11■■□□□ 1.29
POLR2JP52435 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.1■■□□□ 1.29
POLR2JP52435 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
POLR2JP52435 AC148477.6-201ENST00000623746 465 ntBASIC23.1■■□□□ 1.29
POLR2JP52435 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
POLR2JP52435 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
POLR2JP52435 AC138932.3-201ENST00000567634 1902 ntBASIC23.1■■□□□ 1.29
POLR2JP52435 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
POLR2JP52435 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
POLR2JP52435 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.09■■□□□ 1.29
POLR2JP52435 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
POLR2JP52435 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
POLR2JP52435 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
POLR2JP52435 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
POLR2JP52435 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
POLR2JP52435 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.08■■□□□ 1.29
POLR2JP52435 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.08■■□□□ 1.28
POLR2JP52435 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
POLR2JP52435 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
POLR2JP52435 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
POLR2JP52435 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
POLR2JP52435 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.07■■□□□ 1.28
POLR2JP52435 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
POLR2JP52435 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
POLR2JP52435 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms