Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNCAP37840 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.84■□□□□ 0.77
SNCAP37840 AC012676.1-201ENST00000574705 1949 ntBASIC19.84■□□□□ 0.77
SNCAP37840 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNCAP37840 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SNCAP37840 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNCAP37840 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SNCAP37840 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNCAP37840 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.83■□□□□ 0.76
SNCAP37840 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.83■□□□□ 0.76
SNCAP37840 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNCAP37840 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SNCAP37840 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.82■□□□□ 0.76
SNCAP37840 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.82■□□□□ 0.76
SNCAP37840 AC044849.2-201ENST00000606596 710 ntBASIC19.82■□□□□ 0.76
SNCAP37840 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNCAP37840 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNCAP37840 AC087741.3-201ENST00000624270 1347 ntBASIC19.81■□□□□ 0.76
SNCAP37840 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNCAP37840 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.81■□□□□ 0.76
SNCAP37840 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNCAP37840 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNCAP37840 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.81■□□□□ 0.76
SNCAP37840 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNCAP37840 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNCAP37840 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNCAP37840 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNCAP37840 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.8■□□□□ 0.76
SNCAP37840 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNCAP37840 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.79■□□□□ 0.76
SNCAP37840 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNCAP37840 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.79■□□□□ 0.76
SNCAP37840 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SNCAP37840 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNCAP37840 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNCAP37840 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNCAP37840 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNCAP37840 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.78■□□□□ 0.76
SNCAP37840 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.78■□□□□ 0.76
SNCAP37840 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNCAP37840 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNCAP37840 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.78■□□□□ 0.76
SNCAP37840 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SNCAP37840 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNCAP37840 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNCAP37840 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNCAP37840 AC110285.7-201ENST00000624417 1536 ntBASIC19.77■□□□□ 0.76
SNCAP37840 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNCAP37840 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNCAP37840 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNCAP37840 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNCAP37840 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.77■□□□□ 0.76
SNCAP37840 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.77■□□□□ 0.76
SNCAP37840 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNCAP37840 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNCAP37840 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SNCAP37840 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNCAP37840 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNCAP37840 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.76■□□□□ 0.75
SNCAP37840 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNCAP37840 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SNCAP37840 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNCAP37840 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNCAP37840 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNCAP37840 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNCAP37840 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNCAP37840 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNCAP37840 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNCAP37840 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNCAP37840 AP004609.3-201ENST00000610705 1884 ntBASIC19.73■□□□□ 0.75
SNCAP37840 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNCAP37840 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SNCAP37840 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.73■□□□□ 0.75
SNCAP37840 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.73■□□□□ 0.75
SNCAP37840 AL162393.1-201ENST00000437852 946 ntBASIC19.73■□□□□ 0.75
SNCAP37840 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.73■□□□□ 0.75
SNCAP37840 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNCAP37840 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNCAP37840 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNCAP37840 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNCAP37840 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNCAP37840 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNCAP37840 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.72■□□□□ 0.75
SNCAP37840 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNCAP37840 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNCAP37840 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.72■□□□□ 0.75
SNCAP37840 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SNCAP37840 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SNCAP37840 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SNCAP37840 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNCAP37840 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SNCAP37840 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNCAP37840 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms