Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RPS2P7-201ENST00000447334 885 ntBASIC30.6■■■□□ 2.49
KCNA3P22001 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.6■■■□□ 2.49
KCNA3P22001 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.6■■■□□ 2.49
KCNA3P22001 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
KCNA3P22001 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
KCNA3P22001 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
KCNA3P22001 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
KCNA3P22001 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
KCNA3P22001 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.58■■■□□ 2.49
KCNA3P22001 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.58■■■□□ 2.49
KCNA3P22001 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
KCNA3P22001 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.58■■■□□ 2.49
KCNA3P22001 AL139246.5-201ENST00000606645 996 ntBASIC30.58■■■□□ 2.49
KCNA3P22001 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
KCNA3P22001 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.57■■■□□ 2.48
KCNA3P22001 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
KCNA3P22001 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
KCNA3P22001 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
KCNA3P22001 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
KCNA3P22001 KRT125P-201ENST00000546827 989 ntBASIC30.57■■■□□ 2.48
KCNA3P22001 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
KCNA3P22001 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.56■■■□□ 2.48
KCNA3P22001 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KCNA3P22001 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
KCNA3P22001 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
KCNA3P22001 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.55■■■□□ 2.48
KCNA3P22001 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KCNA3P22001 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KCNA3P22001 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
KCNA3P22001 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.53■■■□□ 2.48
KCNA3P22001 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.52■■■□□ 2.48
KCNA3P22001 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KCNA3P22001 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
KCNA3P22001 KRT16P3-201ENST00000439127 1283 ntBASIC30.52■■■□□ 2.48
KCNA3P22001 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KCNA3P22001 BX664725.1-201ENST00000438252 379 ntBASIC30.51■■■□□ 2.47
KCNA3P22001 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.51■■■□□ 2.47
KCNA3P22001 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
KCNA3P22001 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.51■■■□□ 2.47
KCNA3P22001 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
KCNA3P22001 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
KCNA3P22001 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.47
KCNA3P22001 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KCNA3P22001 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.5■■■□□ 2.47
KCNA3P22001 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
KCNA3P22001 AP002414.2-202ENST00000590929 1450 ntBASIC30.5■■■□□ 2.47
KCNA3P22001 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.49■■■□□ 2.47
KCNA3P22001 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.49■■■□□ 2.47
KCNA3P22001 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
KCNA3P22001 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
KCNA3P22001 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
KCNA3P22001 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.47■■■□□ 2.47
KCNA3P22001 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
KCNA3P22001 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
KCNA3P22001 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
KCNA3P22001 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
KCNA3P22001 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
KCNA3P22001 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
KCNA3P22001 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.46■■■□□ 2.47
KCNA3P22001 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.46■■■□□ 2.47
KCNA3P22001 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
KCNA3P22001 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
KCNA3P22001 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
KCNA3P22001 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.47
KCNA3P22001 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
KCNA3P22001 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KCNA3P22001 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.44■■■□□ 2.46
KCNA3P22001 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
KCNA3P22001 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KCNA3P22001 ABCB10P3-201ENST00000561950 2166 ntBASIC30.44■■■□□ 2.46
KCNA3P22001 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
KCNA3P22001 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KCNA3P22001 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
KCNA3P22001 AC131281.2-201ENST00000520478 145 ntBASIC30.43■■■□□ 2.46
KCNA3P22001 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC30.43■■■□□ 2.46
KCNA3P22001 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
KCNA3P22001 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KCNA3P22001 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.42■■■□□ 2.46
KCNA3P22001 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.42■■■□□ 2.46
KCNA3P22001 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
KCNA3P22001 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
KCNA3P22001 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
KCNA3P22001 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
KCNA3P22001 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.41■■■□□ 2.46
KCNA3P22001 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
KCNA3P22001 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
KCNA3P22001 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.4■■■□□ 2.46
KCNA3P22001 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
KCNA3P22001 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
KCNA3P22001 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KCNA3P22001 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KCNA3P22001 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.39■■■□□ 2.46
KCNA3P22001 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KCNA3P22001 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.39■■■□□ 2.46
KCNA3P22001 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.39■■■□□ 2.46
KCNA3P22001 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.39■■■□□ 2.46
KCNA3P22001 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.39■■■□□ 2.46
KCNA3P22001 AC137630.3-201ENST00000607245 391 ntBASIC30.39■■■□□ 2.46
KCNA3P22001 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.38■■■□□ 2.45
KCNA3P22001 KRT18P24-201ENST00000344739 1156 ntBASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms