Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.71■■□□□ 1.07
MRPL3P09001 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MRPL3P09001 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPL3P09001 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.7■■□□□ 1.06
MRPL3P09001 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
MRPL3P09001 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
MRPL3P09001 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MRPL3P09001 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MRPL3P09001 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.7■■□□□ 1.06
MRPL3P09001 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.69■■□□□ 1.06
MRPL3P09001 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
MRPL3P09001 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.69■■□□□ 1.06
MRPL3P09001 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MRPL3P09001 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.69■■□□□ 1.06
MRPL3P09001 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.69■■□□□ 1.06
MRPL3P09001 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MRPL3P09001 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MRPL3P09001 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MRPL3P09001 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MRPL3P09001 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
MRPL3P09001 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
MRPL3P09001 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.67■■□□□ 1.06
MRPL3P09001 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.67■■□□□ 1.06
MRPL3P09001 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MRPL3P09001 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
MRPL3P09001 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MRPL3P09001 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MRPL3P09001 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.66■■□□□ 1.06
MRPL3P09001 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MRPL3P09001 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MRPL3P09001 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MRPL3P09001 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MRPL3P09001 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MRPL3P09001 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MRPL3P09001 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MRPL3P09001 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.65■■□□□ 1.06
MRPL3P09001 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.65■■□□□ 1.06
MRPL3P09001 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MRPL3P09001 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MRPL3P09001 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.64■■□□□ 1.05
MRPL3P09001 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MRPL3P09001 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
MRPL3P09001 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
MRPL3P09001 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MRPL3P09001 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
MRPL3P09001 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MRPL3P09001 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MRPL3P09001 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MRPL3P09001 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MRPL3P09001 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
MRPL3P09001 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MRPL3P09001 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
MRPL3P09001 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MRPL3P09001 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MRPL3P09001 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.63■■□□□ 1.05
MRPL3P09001 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
MRPL3P09001 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MRPL3P09001 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
MRPL3P09001 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MRPL3P09001 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.62■■□□□ 1.05
MRPL3P09001 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.62■■□□□ 1.05
MRPL3P09001 LINC01971-201ENST00000617888 1048 ntBASIC21.62■■□□□ 1.05
MRPL3P09001 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MRPL3P09001 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
MRPL3P09001 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MRPL3P09001 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
MRPL3P09001 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MRPL3P09001 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.6■■□□□ 1.05
MRPL3P09001 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MRPL3P09001 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MRPL3P09001 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MRPL3P09001 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MRPL3P09001 MIR219A2-201ENST00000608502 1504 ntBASIC21.6■■□□□ 1.05
MRPL3P09001 AC142381.3-201ENST00000568208 1670 ntBASIC21.6■■□□□ 1.05
MRPL3P09001 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRPL3P09001 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
MRPL3P09001 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRPL3P09001 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.59■■□□□ 1.05
MRPL3P09001 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.59■■□□□ 1.05
MRPL3P09001 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.59■■□□□ 1.05
MRPL3P09001 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MRPL3P09001 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MRPL3P09001 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MRPL3P09001 AC096887.2-201ENST00000623443 1957 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L13-201ENST00000554103 1267 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L15-201ENST00000611059 1267 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L23-201ENST00000615195 1269 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L24-201ENST00000617576 1269 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L22-201ENST00000618238 1269 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L20-201ENST00000619712 1269 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L21-201ENST00000622058 1269 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L10-201ENST00000622460 1267 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 DUX4L25-201ENST00000624915 1269 ntBASIC21.58■■□□□ 1.05
MRPL3P09001 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MRPL3P09001 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
MRPL3P09001 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
MRPL3P09001 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.57■■□□□ 1.04
MRPL3P09001 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MRPL3P09001 AC022211.4-201ENST00000625094 2161 ntBASIC21.57■■□□□ 1.04
MRPL3P09001 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms