Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGN1P05114 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMGN1P05114 AC142381.3-201ENST00000568208 1670 ntBASIC21.93■■□□□ 1.1
HMGN1P05114 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGN1P05114 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMGN1P05114 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGN1P05114 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGN1P05114 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMGN1P05114 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HMGN1P05114 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.92■■□□□ 1.1
HMGN1P05114 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.92■■□□□ 1.1
HMGN1P05114 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGN1P05114 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGN1P05114 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
HMGN1P05114 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HMGN1P05114 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGN1P05114 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HMGN1P05114 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMGN1P05114 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGN1P05114 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGN1P05114 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGN1P05114 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGN1P05114 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMGN1P05114 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMGN1P05114 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HMGN1P05114 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.89■■□□□ 1.09
HMGN1P05114 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
HMGN1P05114 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGN1P05114 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.88■■□□□ 1.09
HMGN1P05114 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGN1P05114 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGN1P05114 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGN1P05114 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGN1P05114 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGN1P05114 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGN1P05114 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGN1P05114 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
HMGN1P05114 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 AC008813.1-201ENST00000536597 885 ntBASIC21.87■■□□□ 1.09
HMGN1P05114 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
HMGN1P05114 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGN1P05114 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HMGN1P05114 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGN1P05114 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.86■■□□□ 1.09
HMGN1P05114 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGN1P05114 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGN1P05114 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGN1P05114 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGN1P05114 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
HMGN1P05114 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGN1P05114 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGN1P05114 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
HMGN1P05114 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.84■■□□□ 1.09
HMGN1P05114 LINC01971-201ENST00000617888 1048 ntBASIC21.84■■□□□ 1.09
HMGN1P05114 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGN1P05114 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.84■■□□□ 1.09
HMGN1P05114 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGN1P05114 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.83■■□□□ 1.09
HMGN1P05114 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.83■■□□□ 1.09
HMGN1P05114 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
HMGN1P05114 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.83■■□□□ 1.08
HMGN1P05114 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.82■■□□□ 1.08
HMGN1P05114 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGN1P05114 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGN1P05114 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGN1P05114 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGN1P05114 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
HMGN1P05114 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HMGN1P05114 AC022211.4-201ENST00000625094 2161 ntBASIC21.82■■□□□ 1.08
HMGN1P05114 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGN1P05114 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGN1P05114 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGN1P05114 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMGN1P05114 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.81■■□□□ 1.08
HMGN1P05114 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.81■■□□□ 1.08
HMGN1P05114 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
HMGN1P05114 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMGN1P05114 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGN1P05114 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMGN1P05114 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L13-201ENST00000554103 1267 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L15-201ENST00000611059 1267 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L23-201ENST00000615195 1269 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L24-201ENST00000617576 1269 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L22-201ENST00000618238 1269 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L20-201ENST00000619712 1269 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L21-201ENST00000622058 1269 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L10-201ENST00000622460 1267 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 AC148477.6-201ENST00000623746 465 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 DUX4L25-201ENST00000624915 1269 ntBASIC21.8■■□□□ 1.08
HMGN1P05114 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGN1P05114 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
HMGN1P05114 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGN1P05114 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms