Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT33AO76009 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT33AO76009 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT33AO76009 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT33AO76009 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT33AO76009 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT33AO76009 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT33AO76009 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT33AO76009 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT33AO76009 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
KRT33AO76009 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT33AO76009 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
KRT33AO76009 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT33AO76009 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT33AO76009 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.89■■□□□ 1.09
KRT33AO76009 GPX1-201ENST00000419349 1106 ntBASIC21.89■■□□□ 1.09
KRT33AO76009 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT33AO76009 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT33AO76009 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT33AO76009 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT33AO76009 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.88■■□□□ 1.09
KRT33AO76009 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT33AO76009 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT33AO76009 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT33AO76009 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT33AO76009 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT33AO76009 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT33AO76009 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
KRT33AO76009 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT33AO76009 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT33AO76009 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
KRT33AO76009 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
KRT33AO76009 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT33AO76009 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT33AO76009 AC060814.1-201ENST00000554326 538 ntBASIC21.86■■□□□ 1.09
KRT33AO76009 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT33AO76009 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KRT33AO76009 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT33AO76009 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT33AO76009 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT33AO76009 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT33AO76009 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT33AO76009 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT33AO76009 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT33AO76009 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
KRT33AO76009 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT33AO76009 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT33AO76009 AC091060.1-201ENST00000623524 1766 ntBASIC21.84■■□□□ 1.09
KRT33AO76009 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT33AO76009 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KRT33AO76009 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT33AO76009 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.83■■□□□ 1.09
KRT33AO76009 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
KRT33AO76009 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.82■■□□□ 1.08
KRT33AO76009 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT33AO76009 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT33AO76009 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT33AO76009 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT33AO76009 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.82■■□□□ 1.08
KRT33AO76009 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT33AO76009 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT33AO76009 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT33AO76009 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT33AO76009 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.81■■□□□ 1.08
KRT33AO76009 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KRT33AO76009 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
KRT33AO76009 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
KRT33AO76009 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT33AO76009 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT33AO76009 HSD17B1P1-201ENST00000590052 955 ntBASIC21.79■■□□□ 1.08
KRT33AO76009 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT33AO76009 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT33AO76009 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT33AO76009 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.78■■□□□ 1.08
KRT33AO76009 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT33AO76009 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.78■■□□□ 1.08
KRT33AO76009 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KRT33AO76009 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT33AO76009 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT33AO76009 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT33AO76009 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT33AO76009 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT33AO76009 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT33AO76009 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.77■■□□□ 1.08
KRT33AO76009 AP004609.3-201ENST00000610705 1884 ntBASIC21.77■■□□□ 1.08
KRT33AO76009 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
KRT33AO76009 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
KRT33AO76009 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT33AO76009 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.76■■□□□ 1.07
KRT33AO76009 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT33AO76009 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT33AO76009 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms