Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.32■■□□□ 1
SMPD2O60906 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.32■■□□□ 1
SMPD2O60906 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
SMPD2O60906 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SMPD2O60906 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.31■■□□□ 1
SMPD2O60906 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMPD2O60906 BHLHE23-202ENST00000612929 1109 ntBASIC21.3■■□□□ 1
SMPD2O60906 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.3■■□□□ 1
SMPD2O60906 AL035685.1-201ENST00000636663 812 ntBASIC21.3■■□□□ 1
SMPD2O60906 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMPD2O60906 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.3■■□□□ 1
SMPD2O60906 AL121749.1-202ENST00000609313 2153 ntBASIC21.3■■□□□ 1
SMPD2O60906 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMPD2O60906 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.29■■□□□ 1
SMPD2O60906 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.29■■□□□ 1
SMPD2O60906 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMPD2O60906 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMPD2O60906 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMPD2O60906 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMPD2O60906 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMPD2O60906 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.28■■□□□ 1
SMPD2O60906 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMPD2O60906 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMPD2O60906 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SMPD2O60906 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMPD2O60906 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMPD2O60906 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.27■■□□□ 1
SMPD2O60906 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMPD2O60906 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMPD2O60906 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMPD2O60906 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SMPD2O60906 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMPD2O60906 AP004609.3-201ENST00000610705 1884 ntBASIC21.26■□□□□ 0.99
SMPD2O60906 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMPD2O60906 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMPD2O60906 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMPD2O60906 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMPD2O60906 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMPD2O60906 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.25■□□□□ 0.99
SMPD2O60906 AC026202.3-201ENST00000600805 1127 ntBASIC21.25■□□□□ 0.99
SMPD2O60906 AL451085.2-201ENST00000605085 799 ntBASIC21.25■□□□□ 0.99
SMPD2O60906 AC142472.1-201ENST00000612013 1741 ntBASIC21.25■□□□□ 0.99
SMPD2O60906 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.25■□□□□ 0.99
SMPD2O60906 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.25■□□□□ 0.99
SMPD2O60906 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.25■□□□□ 0.99
SMPD2O60906 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.24■□□□□ 0.99
SMPD2O60906 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SMPD2O60906 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD2O60906 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD2O60906 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.23■□□□□ 0.99
SMPD2O60906 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMPD2O60906 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMPD2O60906 AL359504.2-201ENST00000605506 1601 ntBASIC21.22■□□□□ 0.99
SMPD2O60906 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SMPD2O60906 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMPD2O60906 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.21■□□□□ 0.99
SMPD2O60906 RP9P-202ENST00000450133 1212 ntBASIC21.21■□□□□ 0.99
SMPD2O60906 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.21■□□□□ 0.99
SMPD2O60906 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD2O60906 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMPD2O60906 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMPD2O60906 DUX4L9-201ENST00000449051 1259 ntBASIC21.2■□□□□ 0.98
SMPD2O60906 AC074183.2-201ENST00000623112 922 ntBASIC21.2■□□□□ 0.98
SMPD2O60906 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMPD2O60906 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.2■□□□□ 0.98
SMPD2O60906 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.2■□□□□ 0.98
SMPD2O60906 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD2O60906 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD2O60906 AC139795.1-202ENST00000500444 432 ntBASIC21.19■□□□□ 0.98
SMPD2O60906 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD2O60906 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD2O60906 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
SMPD2O60906 AC093536.1-201ENST00000569153 554 ntBASIC21.18■□□□□ 0.98
SMPD2O60906 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.18■□□□□ 0.98
SMPD2O60906 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD2O60906 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMPD2O60906 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD2O60906 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.18■□□□□ 0.98
SMPD2O60906 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD2O60906 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SMPD2O60906 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD2O60906 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD2O60906 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.17■□□□□ 0.98
SMPD2O60906 AC025884.2-201ENST00000553429 711 ntBASIC21.17■□□□□ 0.98
SMPD2O60906 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMPD2O60906 AC010980.1-201ENST00000587192 1142 ntBASIC21.17■□□□□ 0.98
SMPD2O60906 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD2O60906 KRT8P33-201ENST00000508125 1423 ntBASIC21.17■□□□□ 0.98
SMPD2O60906 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD2O60906 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMPD2O60906 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD2O60906 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms