Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.84■□□□□ 0.61
PDE6DO43924 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6DO43924 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6DO43924 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6DO43924 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6DO43924 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6DO43924 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6DO43924 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6DO43924 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE6DO43924 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDE6DO43924 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6DO43924 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6DO43924 LINC00543-201ENST00000567234 1845 ntBASIC18.83■□□□□ 0.6
PDE6DO43924 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6DO43924 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6DO43924 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.82■□□□□ 0.6
PDE6DO43924 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PDE6DO43924 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6DO43924 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6DO43924 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6DO43924 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6DO43924 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PDE6DO43924 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6DO43924 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6DO43924 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6DO43924 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6DO43924 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6DO43924 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.8■□□□□ 0.6
PDE6DO43924 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6DO43924 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6DO43924 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6DO43924 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6DO43924 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6DO43924 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6DO43924 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6DO43924 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6DO43924 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6DO43924 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6DO43924 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
PDE6DO43924 AC068473.5-201ENST00000616428 2072 ntBASIC18.78■□□□□ 0.6
PDE6DO43924 AC079834.2-201ENST00000609776 1949 ntBASIC18.78■□□□□ 0.6
PDE6DO43924 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6DO43924 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6DO43924 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6DO43924 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6DO43924 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6DO43924 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDE6DO43924 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6DO43924 WHAMMP2-203ENST00000563942 1603 ntBASIC18.77■□□□□ 0.6
PDE6DO43924 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6DO43924 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.77■□□□□ 0.59
PDE6DO43924 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6DO43924 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6DO43924 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6DO43924 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6DO43924 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6DO43924 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6DO43924 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE6DO43924 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6DO43924 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
PDE6DO43924 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6DO43924 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6DO43924 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PDE6DO43924 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6DO43924 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6DO43924 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6DO43924 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.75■□□□□ 0.59
PDE6DO43924 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6DO43924 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6DO43924 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6DO43924 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.74■□□□□ 0.59
PDE6DO43924 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.74■□□□□ 0.59
PDE6DO43924 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6DO43924 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6DO43924 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDE6DO43924 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6DO43924 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDE6DO43924 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6DO43924 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6DO43924 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.73■□□□□ 0.59
PDE6DO43924 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6DO43924 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6DO43924 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6DO43924 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDE6DO43924 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6DO43924 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PDE6DO43924 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE6DO43924 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDE6DO43924 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6DO43924 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
PDE6DO43924 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
PDE6DO43924 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.71■□□□□ 0.58
PDE6DO43924 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms