Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC2O43543 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.11■□□□□ 0.97
XRCC2O43543 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC2O43543 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC2O43543 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC2O43543 DUSP8P4-201ENST00000399538 1761 ntBASIC21.1■□□□□ 0.97
XRCC2O43543 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC2O43543 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC2O43543 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.1■□□□□ 0.97
XRCC2O43543 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.1■□□□□ 0.97
XRCC2O43543 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.1■□□□□ 0.97
XRCC2O43543 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC2O43543 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
XRCC2O43543 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC2O43543 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.09■□□□□ 0.97
XRCC2O43543 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
XRCC2O43543 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC2O43543 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
XRCC2O43543 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC2O43543 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC2O43543 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.09■□□□□ 0.97
XRCC2O43543 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.09■□□□□ 0.97
XRCC2O43543 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.09■□□□□ 0.97
XRCC2O43543 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.09■□□□□ 0.97
XRCC2O43543 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
XRCC2O43543 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC2O43543 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC2O43543 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC2O43543 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
XRCC2O43543 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
XRCC2O43543 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
XRCC2O43543 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC2O43543 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC2O43543 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC2O43543 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC2O43543 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC2O43543 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.07■□□□□ 0.96
XRCC2O43543 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC2O43543 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC2O43543 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC2O43543 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC2O43543 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC2O43543 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC2O43543 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRCC2O43543 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC2O43543 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.04■□□□□ 0.96
XRCC2O43543 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC2O43543 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.04■□□□□ 0.96
XRCC2O43543 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
XRCC2O43543 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.04■□□□□ 0.96
XRCC2O43543 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
XRCC2O43543 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC2O43543 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
XRCC2O43543 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.03■□□□□ 0.96
XRCC2O43543 AC060814.1-201ENST00000554326 538 ntBASIC21.03■□□□□ 0.96
XRCC2O43543 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRCC2O43543 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
XRCC2O43543 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
XRCC2O43543 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRCC2O43543 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.02■□□□□ 0.96
XRCC2O43543 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
XRCC2O43543 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC2O43543 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC2O43543 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRCC2O43543 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
XRCC2O43543 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
XRCC2O43543 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21■□□□□ 0.95
XRCC2O43543 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC2O43543 AC010501.1-201ENST00000606270 1962 ntBASIC20.99■□□□□ 0.95
XRCC2O43543 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC2O43543 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.99■□□□□ 0.95
XRCC2O43543 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.99■□□□□ 0.95
XRCC2O43543 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XRCC2O43543 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.98■□□□□ 0.95
XRCC2O43543 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.98■□□□□ 0.95
XRCC2O43543 AL157400.5-201ENST00000507624 621 ntBASIC20.98■□□□□ 0.95
XRCC2O43543 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC2O43543 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC2O43543 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC2O43543 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC2O43543 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.98■□□□□ 0.95
XRCC2O43543 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
XRCC2O43543 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.97■□□□□ 0.95
XRCC2O43543 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC2O43543 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC2O43543 MIR4449-201ENST00000578365 66 ntBASIC20.97■□□□□ 0.95
XRCC2O43543 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
XRCC2O43543 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
XRCC2O43543 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC2O43543 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC2O43543 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC2O43543 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRCC2O43543 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms