Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SHOXO15266 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.57■□□□□ 0.88
SHOXO15266 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHOXO15266 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHOXO15266 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.57■□□□□ 0.88
SHOXO15266 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SHOXO15266 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.57■□□□□ 0.88
SHOXO15266 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SHOXO15266 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.56■□□□□ 0.88
SHOXO15266 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.56■□□□□ 0.88
SHOXO15266 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHOXO15266 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHOXO15266 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHOXO15266 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.56■□□□□ 0.88
SHOXO15266 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHOXO15266 AC135983.2-203ENST00000454486 1613 ntBASIC20.56■□□□□ 0.88
SHOXO15266 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHOXO15266 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHOXO15266 AC087741.3-201ENST00000624270 1347 ntBASIC20.55■□□□□ 0.88
SHOXO15266 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.55■□□□□ 0.88
SHOXO15266 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHOXO15266 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SHOXO15266 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHOXO15266 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHOXO15266 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHOXO15266 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHOXO15266 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.54■□□□□ 0.88
SHOXO15266 AL162393.1-201ENST00000437852 946 ntBASIC20.54■□□□□ 0.88
SHOXO15266 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.54■□□□□ 0.88
SHOXO15266 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHOXO15266 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHOXO15266 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHOXO15266 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHOXO15266 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHOXO15266 AC044849.2-201ENST00000606596 710 ntBASIC20.53■□□□□ 0.88
SHOXO15266 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.53■□□□□ 0.88
SHOXO15266 LINC00273-201ENST00000539813 1452 ntBASIC20.53■□□□□ 0.88
SHOXO15266 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHOXO15266 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHOXO15266 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHOXO15266 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHOXO15266 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.52■□□□□ 0.88
SHOXO15266 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHOXO15266 WHAMMP2-203ENST00000563942 1603 ntBASIC20.52■□□□□ 0.88
SHOXO15266 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHOXO15266 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHOXO15266 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHOXO15266 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SHOXO15266 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHOXO15266 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SHOXO15266 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHOXO15266 AP002414.2-202ENST00000590929 1450 ntBASIC20.5■□□□□ 0.87
SHOXO15266 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHOXO15266 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHOXO15266 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHOXO15266 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.5■□□□□ 0.87
SHOXO15266 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.5■□□□□ 0.87
SHOXO15266 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHOXO15266 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.5■□□□□ 0.87
SHOXO15266 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHOXO15266 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHOXO15266 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.5■□□□□ 0.87
SHOXO15266 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.49■□□□□ 0.87
SHOXO15266 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SHOXO15266 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHOXO15266 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.49■□□□□ 0.87
SHOXO15266 LINC01003-201ENST00000564834 1764 ntBASIC20.49■□□□□ 0.87
SHOXO15266 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
SHOXO15266 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHOXO15266 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHOXO15266 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
SHOXO15266 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHOXO15266 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.48■□□□□ 0.87
SHOXO15266 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHOXO15266 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHOXO15266 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHOXO15266 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHOXO15266 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHOXO15266 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHOXO15266 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHOXO15266 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHOXO15266 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.47■□□□□ 0.87
SHOXO15266 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHOXO15266 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHOXO15266 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHOXO15266 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHOXO15266 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHOXO15266 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.46■□□□□ 0.87
SHOXO15266 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SHOXO15266 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.46■□□□□ 0.87
SHOXO15266 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHOXO15266 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SHOXO15266 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHOXO15266 ERN1-208ENST00000606895 2068 ntBASIC20.46■□□□□ 0.87
SHOXO15266 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHOXO15266 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.45■□□□□ 0.86
SHOXO15266 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.45■□□□□ 0.86
SHOXO15266 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SHOXO15266 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHOXO15266 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms