Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF222A6NCQ9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF222A6NCQ9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF222A6NCQ9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF222A6NCQ9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF222A6NCQ9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF222A6NCQ9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF222A6NCQ9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF222A6NCQ9 WHAMMP3-201ENST00000611636 1609 ntBASIC19.87■□□□□ 0.77
RNF222A6NCQ9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF222A6NCQ9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF222A6NCQ9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF222A6NCQ9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF222A6NCQ9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 AC097639.1-201ENST00000565519 1891 ntBASIC19.86■□□□□ 0.77
RNF222A6NCQ9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF222A6NCQ9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF222A6NCQ9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF222A6NCQ9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF222A6NCQ9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF222A6NCQ9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF222A6NCQ9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 LINC01124-201ENST00000409786 2117 ntBASIC19.84■□□□□ 0.77
RNF222A6NCQ9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF222A6NCQ9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF222A6NCQ9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF222A6NCQ9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF222A6NCQ9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF222A6NCQ9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF222A6NCQ9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF222A6NCQ9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF222A6NCQ9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RNF222A6NCQ9 AC135983.2-203ENST00000454486 1613 ntBASIC19.82■□□□□ 0.76
RNF222A6NCQ9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RNF222A6NCQ9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF222A6NCQ9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RNF222A6NCQ9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF222A6NCQ9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF222A6NCQ9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RNF222A6NCQ9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF222A6NCQ9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RNF222A6NCQ9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF222A6NCQ9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF222A6NCQ9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF222A6NCQ9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF222A6NCQ9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF222A6NCQ9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RNF222A6NCQ9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF222A6NCQ9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF222A6NCQ9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF222A6NCQ9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF222A6NCQ9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF222A6NCQ9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF222A6NCQ9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF222A6NCQ9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF222A6NCQ9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF222A6NCQ9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF222A6NCQ9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF222A6NCQ9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF222A6NCQ9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF222A6NCQ9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF222A6NCQ9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF222A6NCQ9 DUSP8P5-201ENST00000422884 1815 ntBASIC19.76■□□□□ 0.75
RNF222A6NCQ9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF222A6NCQ9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF222A6NCQ9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF222A6NCQ9 WHAMMP2-203ENST00000563942 1603 ntBASIC19.75■□□□□ 0.75
RNF222A6NCQ9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF222A6NCQ9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF222A6NCQ9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF222A6NCQ9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF222A6NCQ9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms