Protein–RNA interactions for Protein: A0A0A0MS05

TRBV5-7, T-cell receptor beta variable 5-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-7A0A0A0MS05 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-7A0A0A0MS05 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.11■□□□□ 0.97
TRBV5-7A0A0A0MS05 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.11■□□□□ 0.97
TRBV5-7A0A0A0MS05 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-7A0A0A0MS05 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-7A0A0A0MS05 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-7A0A0A0MS05 AC138932.3-201ENST00000567634 1902 ntBASIC21.1■□□□□ 0.97
TRBV5-7A0A0A0MS05 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-7A0A0A0MS05 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV5-7A0A0A0MS05 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-7A0A0A0MS05 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV5-7A0A0A0MS05 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV5-7A0A0A0MS05 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRBV5-7A0A0A0MS05 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV5-7A0A0A0MS05 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV5-7A0A0A0MS05 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV5-7A0A0A0MS05 AC096887.2-201ENST00000623443 1957 ntBASIC21.08■□□□□ 0.97
TRBV5-7A0A0A0MS05 AL139125.2-201ENST00000623134 1869 ntBASIC21.08■□□□□ 0.97
TRBV5-7A0A0A0MS05 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV5-7A0A0A0MS05 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.08■□□□□ 0.96
TRBV5-7A0A0A0MS05 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.07■□□□□ 0.96
TRBV5-7A0A0A0MS05 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.07■□□□□ 0.96
TRBV5-7A0A0A0MS05 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-7A0A0A0MS05 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV5-7A0A0A0MS05 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.07■□□□□ 0.96
TRBV5-7A0A0A0MS05 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-7A0A0A0MS05 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.06■□□□□ 0.96
TRBV5-7A0A0A0MS05 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.06■□□□□ 0.96
TRBV5-7A0A0A0MS05 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TRBV5-7A0A0A0MS05 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-7A0A0A0MS05 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV5-7A0A0A0MS05 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.05■□□□□ 0.96
TRBV5-7A0A0A0MS05 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRBV5-7A0A0A0MS05 DUX4L29-201ENST00000425409 679 ntBASIC21.05■□□□□ 0.96
TRBV5-7A0A0A0MS05 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-7A0A0A0MS05 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRBV5-7A0A0A0MS05 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV5-7A0A0A0MS05 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV5-7A0A0A0MS05 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-7A0A0A0MS05 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-7A0A0A0MS05 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
TRBV5-7A0A0A0MS05 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.02■□□□□ 0.96
TRBV5-7A0A0A0MS05 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.02■□□□□ 0.96
TRBV5-7A0A0A0MS05 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRBV5-7A0A0A0MS05 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-7A0A0A0MS05 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TRBV5-7A0A0A0MS05 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRBV5-7A0A0A0MS05 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-7A0A0A0MS05 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-7A0A0A0MS05 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-7A0A0A0MS05 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-7A0A0A0MS05 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 CHML-204ENST00000638121 920 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
TRBV5-7A0A0A0MS05 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-7A0A0A0MS05 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-7A0A0A0MS05 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-7A0A0A0MS05 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV5-7A0A0A0MS05 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-7A0A0A0MS05 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-7A0A0A0MS05 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-7A0A0A0MS05 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-7A0A0A0MS05 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV5-7A0A0A0MS05 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBV5-7A0A0A0MS05 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.98■□□□□ 0.95
TRBV5-7A0A0A0MS05 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-7A0A0A0MS05 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV5-7A0A0A0MS05 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-7A0A0A0MS05 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TRBV5-7A0A0A0MS05 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-7A0A0A0MS05 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-7A0A0A0MS05 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-7A0A0A0MS05 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV5-7A0A0A0MS05 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-7A0A0A0MS05 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV5-7A0A0A0MS05 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
TRBV5-7A0A0A0MS05 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-7A0A0A0MS05 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-7A0A0A0MS05 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.95■□□□□ 0.94
TRBV5-7A0A0A0MS05 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms