Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 SPCS2P4-201ENST00000436160 681 ntBASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 AC087163.2-201ENST00000457299 853 ntBASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 IGHV3-42-201ENST00000520410 361 ntBASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.65■□□□□ 0.58
CXXC1Q9P0U4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CXXC1Q9P0U4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 CRB3P1-201ENST00000449338 276 ntBASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 AC026150.2-201ENST00000564693 1156 ntBASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 AC129492.6-201ENST00000611383 1305 ntBASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXXC1Q9P0U4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 MYCLP1-201ENST00000372451 1075 ntBASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 RARRES2P8-201ENST00000566335 367 ntBASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXXC1Q9P0U4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXXC1Q9P0U4 SPDYE14P-201ENST00000442619 822 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms