Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 GMCL1P1-201ENST00000463439 1581 ntBASIC16.54■□□□□ 0.24
KLHL1Q9NR64 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 AKR1C7P-201ENST00000305623 895 ntBASIC16.53■□□□□ 0.24
KLHL1Q9NR64 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 AC068472.1-201ENST00000474589 881 ntBASIC16.53■□□□□ 0.24
KLHL1Q9NR64 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 AL121912.1-201ENST00000603683 238 ntBASIC16.53■□□□□ 0.24
KLHL1Q9NR64 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL1Q9NR64 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 AC138028.4-201ENST00000564984 1845 ntBASIC16.52■□□□□ 0.24
KLHL1Q9NR64 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 POM121L3P-201ENST00000419331 1163 ntBASIC16.52■□□□□ 0.24
KLHL1Q9NR64 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 SAPCD2P3-201ENST00000455031 850 ntBASIC16.52■□□□□ 0.24
KLHL1Q9NR64 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 AP002469.2-201ENST00000531724 424 ntBASIC16.52■□□□□ 0.24
KLHL1Q9NR64 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.52■□□□□ 0.24
KLHL1Q9NR64 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KLHL1Q9NR64 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 AC139713.2-201ENST00000641328 2723 ntBASIC16.52■□□□□ 0.23
KLHL1Q9NR64 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.52■□□□□ 0.23
KLHL1Q9NR64 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KLHL1Q9NR64 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KLHL1Q9NR64 AL096828.2-201ENST00000567259 1965 ntBASIC16.51■□□□□ 0.23
KLHL1Q9NR64 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KLHL1Q9NR64 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.51■□□□□ 0.23
KLHL1Q9NR64 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KLHL1Q9NR64 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms