Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 AL645728.2-201ENST00000641974 660 ntBASIC16.09■□□□□ 0.17
CHD8Q9HCK8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 COX5BP2-201ENST00000392354 334 ntBASIC16.09■□□□□ 0.17
CHD8Q9HCK8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD8Q9HCK8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 AL023806.1-201ENST00000603994 1649 ntBASIC16.08■□□□□ 0.17
CHD8Q9HCK8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CHD8Q9HCK8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 AC009336.1-201ENST00000608941 1553 ntBASIC16.08■□□□□ 0.16
CHD8Q9HCK8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD8Q9HCK8 ESPNP-201ENST00000270691 2015 ntBASIC16.07■□□□□ 0.16
CHD8Q9HCK8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 SPDYE19P-201ENST00000338590 713 ntBASIC16.07■□□□□ 0.16
CHD8Q9HCK8 MIR346-201ENST00000362234 95 ntBASIC16.07■□□□□ 0.16
CHD8Q9HCK8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 GNAQP1-201ENST00000444815 1067 ntBASIC16.07■□□□□ 0.16
CHD8Q9HCK8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD8Q9HCK8 PDIA3P1-201ENST00000471856 1510 ntBASIC16.07■□□□□ 0.16
CHD8Q9HCK8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 IGHJ2P-201ENST00000454480 60 ntBASIC16.06■□□□□ 0.16
CHD8Q9HCK8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.06■□□□□ 0.16
CHD8Q9HCK8 MIR6775-201ENST00000617557 69 ntBASIC16.06■□□□□ 0.16
CHD8Q9HCK8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms