Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 HMGA1P5-201ENST00000412453 271 ntBASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 NAPSB-206ENST00000562112 1266 ntBASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 AC024563.2-201ENST00000603282 481 ntBASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 AL118508.1-201ENST00000613502 2345 ntBASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 KRT89P-201ENST00000620027 1478 ntBASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD4Q9H0A8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 KRT8P47-201ENST00000604727 1398 ntBASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 AC034232.1-201ENST00000506026 1064 ntBASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.5■□□□□ 0.07
COMMD4Q9H0A8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
COMMD4Q9H0A8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms